getJASPAR: Get JASPAR

Description Usage Arguments Value Examples

View source: R/main.r

Description

A function to be used in conjunction with the mT1_jaspar. Pass 'getJASPAR' a composite motif from the jaspar database and it will return the name of the motif.

Usage

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Arguments

name

A composite motif. IUPAC DNA characters only.

Value

The name of the motif as an atomic character, if it came from the jaspar database, otherwise NULL.

Examples

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# load the required Jaspar motif data
a<-mT1_jaspar$names[1]
getJASPAR(a)

alexjgriffith/mT1 documentation built on Dec. 10, 2017, 8:29 p.m.