getJASPAR: Get JASPAR
In alexjgriffith/mT1: Motifs in Tandem with One Another
Description
Usage
Arguments
Value
Examples
Description
A function to be used in conjunction with the mT1_jaspar.
Pass 'getJASPAR' a composite motif from the jaspar database
and it will return the name of the motif.
Usage
1
Arguments
name
A composite motif. IUPAC DNA characters only.
Value
The name of the motif as an atomic character, if it came
from the jaspar database, otherwise NULL.
Examples
1
2
3
# load the required Jaspar motif data
a<-mT1_jaspar$names[1]
getJASPAR(a)
alexjgriffith/mT1 documentation built on May 10, 2019, 8:53 a.m.
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Description Usage Arguments Value Examples
Description
A function to be used in conjunction with the mT1_jaspar. Pass 'getJASPAR' a composite motif from the jaspar database and it will return the name of the motif.
Usage
1 |
Arguments
name |
A composite motif. IUPAC DNA characters only. |
Value
The name of the motif as an atomic character, if it came from the jaspar database, otherwise NULL.
Examples
1 2 3 | # load the required Jaspar motif data
a<-mT1_jaspar$names[1]
getJASPAR(a)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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