topTables: Three top Tables to be used in the examples
In alexsanchezpla/geneLists: Extracts (sub)vectors or (sub)matrices from a limma "Top-table" applying user- defined filters
Description
Three toptables obtained from a microarray analysis described (in Spanish) at:
https://github.com/alexsanchezpla/scripts/blob/master/Exemple_Analisis_BioC/EjemploAnalisisMicroarrays.pdf
These objects are more than simple top tables, because they are obtained by combining the standard limma output with gene identifiers and expression values.
The original analysis is a comparison between three types of breast cancer tumours
A vs B which yields the AvsB top table
A vs L which yields the AvsL top table
B vs L which yields the BvsL top table
In the current version
Format
Three dataframes containing a mix of topTables, identifiers and expression values
alexsanchezpla/geneLists documentation built on May 12, 2019, 7:41 a.m.
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Description
Three toptables obtained from a microarray analysis described (in Spanish) at: https://github.com/alexsanchezpla/scripts/blob/master/Exemple_Analisis_BioC/EjemploAnalisisMicroarrays.pdf These objects are more than simple top tables, because they are obtained by combining the standard limma output with gene identifiers and expression values. The original analysis is a comparison between three types of breast cancer tumours
A vs B which yields the AvsB top table
A vs L which yields the AvsL top table
B vs L which yields the BvsL top table
In the current version
Format
Three dataframes containing a mix of topTables, identifiers and expression values
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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