Man pages for alexvpickering/GEOfastq
Downloads ENA Fastqs With GEO Accessions
| ascpR | Utility function to run aspera |
| crawl_gse | Get GSE text from GEO |
| crawl_gsms | Crawls SRX pages for each GSM to get metadata. |
| extract_gsms | Extract GSMs needed to download RNA-seq data for a series |
| get_dldir | Gets part of path to download bulk RNAseq sample from EBI or... |
| get_ebi_fastqs | Download fastqs from EBI |
| get_fastqs | Download and RNA-seq fastq data from EBI |
