get_dldir: Gets part of path to download bulk RNAseq sample from EBI or...

Description Usage Arguments Value Examples

View source: R/srp_utils.R

Description

Gets part of path to download bulk RNAseq sample from EBI or NCBI

Usage

1
get_dldir(srr, type = c("ebi", "ncbi"))

Arguments

srr

SRR/ERR run name

type

Either 'ebi' or 'ncbi'

Value

String path used by get_fastqs.

Examples

1
get_dldir('SRR014242')

alexvpickering/GEOfastq documentation built on Oct. 11, 2021, 6:44 p.m.