extract_gsms: Extract GSMs needed to download RNA-seq data for a series
In alexvpickering/GEOfastq: Downloads ENA Fastqs With GEO Accessions
Description
Usage
Arguments
Value
Examples
Description
Extract GSMs needed to download RNA-seq data for a series
Usage
1
extract_gsms(gse_text)
Arguments
gse_text
GSE text returned from crawl_gse
Value
Character vector of sample GSMs for the series gse_name
Examples
1
2
gse_text <- crawl_gse('GSE111459')
gsm_names <- extract_gsms(gse_text)
alexvpickering/GEOfastq documentation built on Oct. 11, 2021, 6:44 p.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Description Usage Arguments Value Examples
Description
Extract GSMs needed to download RNA-seq data for a series
Usage
1 | extract_gsms(gse_text)
|
Arguments
gse_text |
GSE text returned from |
Value
Character vector of sample GSMs for the series gse_name
Examples
1 2 | gse_text <- crawl_gse('GSE111459')
gsm_names <- extract_gsms(gse_text)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.