Man pages for alexvpickering/revigoR
Scrape revigo webapp and plot results
| add_path_genes | Add Gene Names and logFC Values to goana Result |
| convert_xgmml | Convert cytoscape xgmml to data.frames |
| data_to_json | Format forcegraph data.frames to JSON |
| get_gslist.go | Get GO geneset list |
| get_gs.names.go | Get names of gene set |
| get_merged_annotations | Get merged gene names, logfc values, and analysis indicator |
| heatplot | Plot heatmap for genes from goana/kegga analysis |
| hello | Hello, World! |
| revigo_forcegraph | Generate forcegraph plot of revigo GO graph |
| revigo_scatterplot | Revigo MDS plot |
| revigo_scatterplot_original | Revigo MDS plot |
| revigo_treemap | Plot Revigo Treemap |
| scrape_revigo | Submits GO result to revigo and downloads all scripts and... |
| setup_env | Install python packages required by package |
