get_gslist.go: Get GO geneset list
In alexvpickering/revigoR: Scrape revigo webapp and plot results
Description
Usage
Arguments
Value
See Also
Examples
Description
Used by add_path_genes so add significant genes to output of limma::goana.
Adapted from limma::goana
Usage
1
get_gslist.go(species = "Hs")
Arguments
species
string to specify organism annotation package. Default 'Hs' uses org.Hs.eg.db.
Value
Lists of named character vectors. Each list contains a character vector of ENTREZIDs with HGNC symbols as names
for each GO id.
See Also
goana, add_path_genes.
Examples
1
gslist.go <- get_gslist.go('Hs')
alexvpickering/revigoR documentation built on March 17, 2021, 8:09 p.m.
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Description Usage Arguments Value See Also Examples
Description
Used by add_path_genes so add significant genes to output of limma::goana.
Adapted from limma::goana
Usage
1 | get_gslist.go(species = "Hs")
|
Arguments
species |
string to specify organism annotation package. Default |
Value
Lists of named character vectors. Each list contains a character vector of ENTREZIDs with HGNC symbols as names for each GO id.
See Also
goana, add_path_genes.
Examples
1 | gslist.go <- get_gslist.go('Hs')
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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