Man pages for alexwailan/rpinecone
Defines sub-lineages of a clonal expansion via an phylogenetic tree.
| collectdata | collectiondata |
| get_path_distance | Get the distance of a path on tree in graph form. |
| itol_labels_template | Label change Itol Output for Sub-Groups. |
| itol_major_SL_output | Colourstrip Itol Output Major sub-lineages. |
| itol_sublineage_output | Colourstrip Itol Output of Sub-lineage. |
| majorlineage | Major lineage |
| node_tips_max_dist | Node to tips maximum distance. |
| pinecone | pinecone |
| sublineage | Sub-lineage isolates on a phyologentic tree. |
| tips_node_zero_dist | Node to tips zero distance. |
