Man pages for almeidasilvaf/tfhunter
Identification and classification of plant transcription factors
| annotate_pfam | Annotate proteins sequences with PFAM domains |
| classification_scheme | Data frame of TF family classification scheme |
| classify_tfs | Identify TFs and classify them in families |
| get_tf_counts | Get TF frequencies for each species as a SummarizedExperiment... |
| gsu | Protein sequences of the algae species Galdieria sulphuraria |
| gsu_annotation | Domain annotation for the algae species Galdieria sulphuraria... |
| gsu_families | TFs families of the algae species Galdieria sulphuraria The... |
| hmmer_is_installed | Check if HMMER is installed |
| planttfhunter-package | planttfhunter: Identification and classification of plant... |
| tf_counts | TF counts per family in 4 simulated species |
