find_centers: Find blobs centers
In amelbek/pamgeneAnalyzeR: Extract data from PamGene PamChip images
Usage
1
find_centers(image, thresh = "99.7%")
Arguments
image
PamChip image.
thresh
threshold the image to get only the pixels with the highest values. either "auto" or or percentage string (default "99.7
Returns a data frame with the x and y coordinates of the centers, thier row and column number.
Find in the PamChip image the center of each peptide, left and right controls and 8 background points. Use the plot_centers function to check that the centers were detected correcly and adapt the threshold with the thresh parameter.
amelbek/pamgeneAnalyzeR documentation built on May 29, 2019, 8:30 a.m.
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Usage
1 | find_centers(image, thresh = "99.7%")
|
Arguments
image |
PamChip image. |
thresh |
threshold the image to get only the pixels with the highest values. either "auto" or or percentage string (default "99.7 |
Returns a data frame with the x and y coordinates of the centers, thier row and column number.
Find in the PamChip image the center of each peptide, left and right controls and 8 background points. Use the plot_centers function to check that the centers were detected correcly and adapt the threshold with the thresh parameter.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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