Files in ammararuby/MButils
Utility functions for DNA metabarcoding
.Rbuildignore
.gitignore
DESCRIPTION
MButils.Rproj
NAMESPACE
R/assignSpecies_mod.R
R/asv_to_taxonomy.R
R/biplot.R
R/data.R
R/global.R
R/lca.R
R/lookup_tax_data.R
R/lowest_level.R
R/metacoder_internal.R
R/parse_counts.R
R/percent_unassigned.R
R/phylosequtils.R
R/update_assignment.R
README.md
data/assignment.rda
data/seqtab.rda
data/taxonomy.rda
man/assignSpecies_mod.Rd
man/assignment.Rd
man/asv_to_taxonomy.Rd
man/biplot.Rd
man/lca.Rd
man/lookup_tax_data.Rd
man/lowest_level.Rd
man/merge_into_phyloseq.Rd
man/parse_counts.Rd
man/percent_unassigned.Rd
man/seqtab.Rd
man/taxonomy.Rd
man/update_assignment.Rd
tests/testdata/trnLGH.fasta
tests/testthat/test-assign_brassica.R
