parse_counts: Parse read count QC files generated at pipeline steps
In ammararuby/MButils: Utility functions for DNA metabarcoding
parse_counts R Documentation
Parse read count QC files generated at pipeline steps
Description
This function parses text files of sample read counts of
generated during the metabarcoding analysis pipeline for QC purposes.
Usage
parse_counts(f)
Arguments
f
The path to a text file that alternates fastq.gz filenames with
their read counts.
Value
A two-column data frame matching samples to their read counts.
ammararuby/MButils documentation built on Jan. 29, 2023, 11:13 a.m.
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| parse_counts | R Documentation |
Parse read count QC files generated at pipeline steps
Description
This function parses text files of sample read counts of generated during the metabarcoding analysis pipeline for QC purposes.
Usage
parse_counts(f)
Arguments
f |
The path to a text file that alternates fastq.gz filenames with their read counts. |
Value
A two-column data frame matching samples to their read counts.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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