API for andreaskapou/scMET
Bayesian modelling of cell-to-cell DNA methylation heterogeneity
| Global functions | |
|---|---|
| .bb_grad | Source code |
| .bb_hessian | Source code |
| .bb_lik | Source code |
| .bb_mm | Source code |
| .bb_newton | Source code |
| .compute_log_odds_ratio | Source code |
| .compute_odds_ratio | Source code |
| .diff_test_results | Source code |
| .eval_efdr | Source code |
| .eval_efnr | Source code |
| .fix_outliers | Source code |
| .generate_cpgs | Source code |
| .generate_means | Source code |
| .generate_overdisp | Source code |
| .generate_ys | Source code |
| .get_density | Source code |
| .init_w_gamma | Source code |
| .lm_mle_penalized | Source code |
| .onLoad | Source code |
| .poly_design_matrix | Source code |
| .rbf_basis | Source code |
| .rbf_design_matrix | Source code |
| .scatter_theme | Source code |
| .stan_inference | Source code |
| .tail_prob | Source code |
| .thresh_search | Source code |
| bb_mle | Man page Source code |
| create_design_matrix | Man page Source code |
| detect_hvf | Man page |
| detect_hvf_lvf | Man page |
| detect_lvf | Man page |
| differential_methylation, | Man page |
| differential_test, | Man page |
| differential_variability | Man page |
| scMET | Man page |
| scMET-package | Man page |
| sce_to_scmet | Man page Source code |
| scmet | Man page Source code |
| scmet_diff_dt | Man page |
| scmet_differential | Man page Source code |
| scmet_dt | Man page |
| scmet_hvf | Man page Source code |
| scmet_hvf_lvf | Man page |
| scmet_lvf | Man page Source code |
| scmet_mcmc | Man page |
| scmet_plot_efdr_efnr_grid | Man page Source code |
| scmet_plot_estimated_vs_true | Man page Source code |
| scmet_plot_ma | Man page Source code |
| scmet_plot_mean_var | Man page Source code |
| scmet_plot_vf_tail_prob | Man page Source code |
| scmet_plot_volcano | Man page Source code |
| scmet_simulate | Man page Source code |
| scmet_simulate_diff | Man page Source code |
| scmet_to_sce | Man page Source code |
| scmet_vb | Man page |
