API for andreaskapou/scMET
Bayesian modelling of cell-to-cell DNA methylation heterogeneity

Global functions
.bb_grad Source code
.bb_hessian Source code
.bb_lik Source code
.bb_mm Source code
.bb_newton Source code
.compute_log_odds_ratio Source code
.compute_odds_ratio Source code
.diff_test_results Source code
.eval_efdr Source code
.eval_efnr Source code
.fix_outliers Source code
.generate_cpgs Source code
.generate_means Source code
.generate_overdisp Source code
.generate_ys Source code
.get_density Source code
.init_w_gamma Source code
.lm_mle_penalized Source code
.onLoad Source code
.poly_design_matrix Source code
.rbf_basis Source code
.rbf_design_matrix Source code
.scatter_theme Source code
.stan_inference Source code
.tail_prob Source code
.thresh_search Source code
bb_mle Man page Source code
create_design_matrix Man page Source code
detect_hvf Man page
detect_hvf_lvf Man page
detect_lvf Man page
differential_methylation, Man page
differential_test, Man page
differential_variability Man page
scMET Man page
scMET-package Man page
sce_to_scmet Man page Source code
scmet Man page Source code
scmet_diff_dt Man page
scmet_differential Man page Source code
scmet_dt Man page
scmet_hvf Man page Source code
scmet_hvf_lvf Man page
scmet_lvf Man page Source code
scmet_mcmc Man page
scmet_plot_efdr_efnr_grid Man page Source code
scmet_plot_estimated_vs_true Man page Source code
scmet_plot_ma Man page Source code
scmet_plot_mean_var Man page Source code
scmet_plot_vf_tail_prob Man page Source code
scmet_plot_volcano Man page Source code
scmet_simulate Man page Source code
scmet_simulate_diff Man page Source code
scmet_to_sce Man page Source code
scmet_vb Man page
andreaskapou/scMET documentation built on June 1, 2022, 11:47 p.m.