scmet_plot_vf_tail_prob | R Documentation |

Function for plotting the tail probabilities associated with the
HVF/LVF analysis. The tail probabilities are plotted on the y-axis, and the
user can choose which parameter can be plotted on the x-axis, using the `x`

parameter.

scmet_plot_vf_tail_prob( obj, x = "mu", task = "hvf", title = NULL, nfeatures = NULL )

`obj` |
The scMET object after calling the |

`x` |
The parameter to plot on the x-axis. Values can be |

`task` |
The task for identifying variable, either "hvf" or "lvf". |

`title` |
Optional title, default NULL. |

`nfeatures` |
Optional parameter, denoting a subset of number of features to plot (only for non HVF/LVF features). Mostly to reduce over-plotting. |

A ggplot2 object.

C.A.Kapourani C.A.Kapourani@ed.ac.uk

`scmet`

, `scmet_differential`

,
`scmet_hvf_lvf`

, `scmet_plot_mean_var`

,
`scmet_plot_efdr_efnr_grid`

, `scmet_plot_volcano`

,
`scmet_plot_ma`

# Fit scMET obj <- scmet(Y = scmet_dt$Y, X = scmet_dt$X, L = 4, iter = 100) obj <- scmet_hvf(scmet_obj = obj, delta_e = 0.7) scmet_plot_vf_tail_prob(obj = obj, x = "mu")

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