Man pages for andreaskapou/scMET
Bayesian modelling of cell-to-cell DNA methylation heterogeneity
| bb_mle | Beta binomial maximum likelihood estimation (BB MLE) |
| create_design_matrix | Create design matrix |
| sce_to_scmet | Convert from SingleCellExperiment to scmet object |
| scmet | Perform inference with scMET |
| scmet_diff_dt | Synthetic methylation data from two groups of cells |
| scmet_differential | Differential testing using scMET |
| scmet_dt | Synthetic methylation data from a single population |
| scmet_hvf_lvf | Detect highly (or lowly) variable features with scMET |
| scMET-package | 'scMET': Bayesian modelling of DNA methylation at single-cell... |
| scmet_plot_efdr_efnr_grid | Plot EFDR/EFNR grid |
| scmet_plot_estimated_vs_true | Plot true versus inferred parameter estimated. |
| scmet_plot_ma | MA plot for differential analysis |
| scmet_plot_mean_var | Plotting mean-variability relationship |
| scmet_plot_vf_tail_prob | Plot tail probabilities for variable feature analysis |
| scmet_plot_volcano | Volcano plot for differential analysis |
| scmet_simulate | Simulate methylation data from scMET. |
| scmet_simulate_diff | Simulate differential methylation data from scMET. |
| scmet_to_sce | Convert from scmet to SingleCellExperiment object. |
