change_alpha: Loops over values of alpha - **needs tidying up**
In andrew-edwards/eDNAfalse: Methods for Detecting Suspected False Positives in eDNA Samples
Description
Usage
Arguments
Value
Author(s)
Description
Removes false positives for various values of the tolerance parameter alpha
Usage
1
change_alpha(data, alpha_vec = c(0.01, seq(0.1, 1, 0.1)), aT = 4)
Arguments
data
As for remove_false_pos()
alpha_vec
Vector of alpha (tolerance) values over which to run remove_false_pos().
aT
Total number of control species.
Value
List consisting of:
***: list of dataframes, one for each result of the corresponding
value of alpha;
num_zeroed: vector corresponding to the number of reads set to zero for each value of alphavec;
num_mock_sp_left: ***
num_samp_with_mock: ***
Author(s)
Andrew Edwards
andrew-edwards/eDNAfalse documentation built on Dec. 19, 2020, 1:08 a.m.
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Description Usage Arguments Value Author(s)
Description
Removes false positives for various values of the tolerance parameter alpha
Usage
1 | change_alpha(data, alpha_vec = c(0.01, seq(0.1, 1, 0.1)), aT = 4)
|
Arguments
data |
As for remove_false_pos() |
alpha_vec |
Vector of alpha (tolerance) values over which to run remove_false_pos(). |
aT |
Total number of control species. |
Value
List consisting of: ***: list of dataframes, one for each result of the corresponding value of alpha; num_zeroed: vector corresponding to the number of reads set to zero for each value of alphavec; num_mock_sp_left: *** num_samp_with_mock: ***
Author(s)
Andrew Edwards
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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