mzmatch.ipeak.util.BreakupRelated: mzmatch.ipeak.util.BreakupRelated

In andzajan/mzmatch.R: mzmatch and PeakML integration for XCMS.

Description

Splits the derivative clusters found by mzmatch.

Usage

mzmatch.ipeak.util.BreakupRelated(JHeapSize=1425, i, o, h, v)

Arguments

JHeapSize	Amount of RAM memory in megabytes, which should be reserved by the Java virtual machine. The default value is 1425 megabytes.
i	The input file (in PeakML format), resulting from the tool mzmatch.ipeak.sort.RelatedPeaks. When this option is not set the input is read from the standard input.
o	Specifies the output directory where all the PeakML files are written with the clusters of derivatives.
h	When this is set, the help is shown.
v	When this is set, the progress is shown on the standard output.

Details

Splits the derivative clusters found by mzmatch.ipeak.sort.RelatedPeaks into separate files. Each file is named with the relation.id found in the annotations.

Value

This function returns no value.

Author(s)

RA Scheltema ([e-mail])

References

0. PeakML/mzMatch - a file format, Java library, R library and tool-chain for mass spectrometry data analysis. In preparation.

See Also

PeakML.xcms.read

andzajan/mzmatch.R documentation built on Dec. 1, 2020, 11:33 a.m.