match_patients_from_num: match_patients_from_num

In aneuraz/DWHtools2: Tools to query DWH

Description

For Dr.Warehouse and i2b2 Match n (n_match) patients for each patient in a cohort/patient set.

Usage

match_patients_from_num(num = NULL, num_type = NULL,
  birth_range = NULL, concepts_range = NULL, n_match = NULL,
  match_save = FALSE, match_save_title = NULL, config = NULL)

Arguments

num	the identifier of the cohort/num_temp
num_type	type of num: one of c('num_temp', 'cohorte')
birth_range	integer >= 0 to compute the range of authorized birth_years for matching. the range will be: [birth_year - birth_range ; birth_year + birth_range]
match_save	For Dr.Warehouse (in i2b2 patient set is automatically saved). save the matched patients in a cohort (default = 'FALSE')
match_save_title	title for the saved cohort.
config	a config environment created by the function getConfig.
concepts_range.	float > 0 to compute the range of authorized uniq_concepts for matching. the range will be: [uniq_concepts - (uniq_concepts * concepts_range) ; uniq_concepts + (uniq_concepts * concepts_range)]
n_match:	number of patients to match

Value

the identifier of the matched cohort of patients

aneuraz/DWHtools2 documentation built on Sept. 6, 2019, 8:11 p.m.