Man pages for angy89/TinderMIX
TinderMIX: An R package to cluster gene expression by contour plots
| build_items_list | This function computes the venn diagram of the genes... |
| compute_anova_dose_time | This function computes a two way anova between dose and time... |
| compute_BMD_IC50 | This function identify the BMD area and the IC50 value in the... |
| compute_fc | This function starts from a phenodata and gene expression... |
| create_contour | This function fits a 3D regression model for every gene in... |
| create_gene_table | This function create a table with the information on the... |
| label2DMap | This function assigns a label to contour map |
| plot3d | This function plots the fitted 3d surface for the expression... |
| plot_cake_diagrams_time_dose_effect | this function takes in input the result of the function... |
| plot_dynamic_dose_responsive_map | This function takes in input the result of the function... |
| plot_kegg_radar_chart | this function takes in input the pathways enriched and retur... |
| plot_number_genes_labels | This function takes in input the result of the function... |
| read_excel_allsheets | read excel file as a list of dataframe |
| run_all_BMD_IC50 | This function run the compute_BMD_IC50 for all genes and... |
