Files in anna-pacinkova/intomics_package
Integrative analysis of multi-omics data to infer regulatory networks
DESCRIPTION
IntOMICS.Rproj
NAMESPACE
R/BN_module_func.R
R/Evaluation_func.R
R/NET_manipulation_func.R
R/OMICS_module_func.R
R/data.R
data/BN_mod_res.rda
data/PK.rda
data/TFtarg_mat.rda
data/annot.rda
data/gene_annot.rda
data/layers_def.rda
data/omics.rda
man/BGe_node.Rd
man/BGe_score.Rd
man/BN_mod_res.Rd
man/BN_module.Rd
man/B_prior_mat.Rd
man/DAGcorescore.Rd
man/MBR.Rd
man/MC3.Rd
man/MC3_constantBGe.Rd
man/OMICS_module.Rd
man/PK.Rd
man/TFtarg_mat.Rd
man/acceptance_check.Rd
man/annot.Rd
man/edge_proposal.Rd
man/edge_types.Rd
man/empB_heatmap.Rd
man/energy_function_node_specific.Rd
man/epsilon.Rd
man/fan_in_reverse.Rd
man/first_adapt_phase.Rd
man/gene_annot.Rd
man/init.net.mcmc.Rd
man/is.acyclic.Rd
man/layers_def.Rd
man/legend_custom.Rd
man/lm_meth.Rd
man/mcmc.simulation_sampling.phase.Rd
man/neighborhood_size.Rd
man/normalise.Rd
man/omics.Rd
man/parent_sets_sum_scores_X.Rd
man/parent_sets_sum_scores_childrenX.Rd
man/pf_UB_est.Rd
man/range_01.Rd
man/sample.chain.Rd
man/sampling_phase.Rd
man/scoreparameters_BiDAG_BGe.Rd
man/second_adapt_phase.Rd
man/source_net_def.Rd
man/squared_jumping.Rd
man/trace_plots.Rd
man/transient_phase.Rd
man/variance_target.Rd
vignettes/IntOMICS_vignette.Rmd
vignettes/IntOMICS_vignette.html
vignettes/figures/IntOMICS_framework_METH_empB_modules.png
vignettes/figures/beta_values.svg
vignettes/figures/convergence_RMS.svg
vignettes/figures/fin_net_legend.svg
vignettes/figures/post_prob_edges.svg
