plot_subnet: plot_subnet

In antagomir/netresponse: Functional Network Analysis

plot_subnet

Description

Plot the given subnetwork.

Usage

plot_subnet(x, subnet.id, network, plot_names = TRUE, ...)

Arguments

x	Result from NetResponse (detect.responses function).
subnet.id	Subnet id.
network	Original network used in the modelling.
plot_names	Plot node names (TRUE) or indices (FALSE).
...	Further arguments for plot function.

Value

Used for its side-effects. Returns a matrix that describes the investigated subnetwork.

Author(s)

Leo Lahti, Olli-Pekka Huovilainen and Antonio Gusmao. Maintainer: Leo Lahti <[e-mail]>

References

L. Lahti et al.: Global modeling of transcriptional responses in interaction networks. Submitted.

Examples

#
# res <- detect.responses(D, netw, verbose = FALSE)
# net <- plot_subnet(res, subnet.idx = 1)

antagomir/netresponse documentation built on March 30, 2023, 7:24 a.m.