estimate_null_parameters: Estimate Null Parameters

Description Usage Arguments Value

Description

estimate the shape parameters of a beta-binomial null dist

Usage

1
2
estimate_null_parameters(data_frame, minimum_coverage = 10,
  n_breaks = 11, spline_order = 4, cores = 1)

Arguments

data_frame

a data frame containing allele counts

minimum_coverage

filter variants to those with at least this coverage

n_breaks

n_breaks for npbin

spline_order

spline order for npbin

cores

number of cores to use

Value

list of null parameters


anthony-aylward/callimbalance documentation built on May 25, 2019, 11:31 p.m.