as.DESeqDataSet: Convert to DESeqDataSet
In aoles/DEFormats: Differential gene expression data formats converter
as.DESeqDataSet R Documentation
Convert to DESeqDataSet
Description
Coerces an object to DESeqDataSet.
Usage
as.DESeqDataSet(x, ...)
## S3 method for class 'DGEList'
as.DESeqDataSet(x, ...)
Arguments
x
an R object
...
additional arguments to be passed to methods
Value
A DESeqDataSet object
Methods (by class)
-
as.DESeqDataSet(DGEList): Coerce DGEList-class objects
to DESeqDataSet.
Author(s)
Andrzej Oleś <andrzej.oles@gmail.com>, 2016-2023
See Also
as.DGEList
Examples
require("edgeR")
counts = simulateRnaSeqData()
group = rep(c("case", "control"), each = 3)
dge = DGEList(counts = counts, group = group)
dge
as.DESeqDataSet(dge)
aoles/DEFormats documentation built on April 18, 2023, 12:07 a.m.
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| as.DESeqDataSet | R Documentation |
Convert to DESeqDataSet
Description
Coerces an object to DESeqDataSet.
Usage
as.DESeqDataSet(x, ...)
## S3 method for class 'DGEList'
as.DESeqDataSet(x, ...)
Arguments
x |
an R object |
... |
additional arguments to be passed to methods |
Value
A DESeqDataSet object
Methods (by class)
-
as.DESeqDataSet(DGEList): CoerceDGEList-classobjects toDESeqDataSet.
Author(s)
Andrzej Oleś <andrzej.oles@gmail.com>, 2016-2023
See Also
as.DGEList
Examples
require("edgeR")
counts = simulateRnaSeqData()
group = rep(c("case", "control"), each = 3)
dge = DGEList(counts = counts, group = group)
dge
as.DESeqDataSet(dge)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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