as.DGEList: Convert to DGEList
In aoles/DEFormats: Differential gene expression data formats converter
as.DGEList R Documentation
Convert to DGEList
Description
Coerces an object to DGEList.
Usage
as.DGEList(x, ...)
## S3 method for class 'DESeqDataSet'
as.DGEList(x, ...)
Arguments
x
an R object
...
additional arguments to be passed to methods
Value
A DGEList object.
Methods (by class)
-
as.DGEList(DESeqDataSet): Coerce DESeqDataSet objects to
DGEList-class.
Author(s)
Andrzej Oleś <andrzej.oles@gmail.com>, 2016-2023
See Also
as.DESeqDataSet
Examples
require("DESeq2")
se = simulateRnaSeqData(output = "RangedSummarizedExperiment")
se
dds = DESeqDataSet(se, design = ~ condition)
dds
as.DGEList(dds)
aoles/DEFormats documentation built on April 18, 2023, 12:07 a.m.
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| as.DGEList | R Documentation |
Convert to DGEList
Description
Coerces an object to DGEList.
Usage
as.DGEList(x, ...)
## S3 method for class 'DESeqDataSet'
as.DGEList(x, ...)
Arguments
x |
an R object |
... |
additional arguments to be passed to methods |
Value
A DGEList object.
Methods (by class)
-
as.DGEList(DESeqDataSet): CoerceDESeqDataSetobjects toDGEList-class.
Author(s)
Andrzej Oleś <andrzej.oles@gmail.com>, 2016-2023
See Also
as.DESeqDataSet
Examples
require("DESeq2")
se = simulateRnaSeqData(output = "RangedSummarizedExperiment")
se
dds = DESeqDataSet(se, design = ~ condition)
dds
as.DGEList(dds)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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