filter_psi: Filter results for PSI metric

In aquaMetrics/macroinvertebratesMetrics: Macroinvertebrate Biotic indices

Filter results for PSI metric

Description

Filter results for PSI metric

Usage

filter_psi(data, taxa_list = taxa_list)

Arguments

data	Dataframe of ecology results with mandatory four columns: response - Numeric count result. label - Taxon name matching names in macroinvertebrates::macroinvertebrateTaxa table question - 'Taxon abundance' sample_id - Unique identifier for each sample (number or text)
taxa_list	The taxonomic level the sample(s) have been identified at according to specified taxa lists as described in WFD100 Further Development of River Invertebrate Classification Tool. Either "TL2" - Taxa list 2, "TL3" - Taxa list 2 or "TL5" Taxa list 5 or "TL4". PSI TL lists don't match RIVPACS species e.g. TL3 list includes 'Oligochaeta' even though it is not a TL3 taxa according to WFD100.

Value

Dataframe

aquaMetrics/macroinvertebratesMetrics documentation built on Feb. 3, 2024, 2:35 a.m.