The package provides R scripts to perform the oligotyping approach (http://oligotyping.org) as a way to exploring microbial patterns through subtle nucleotide variation within 16S rRNA gene tag sequences of closely related taxa. The original oligotype paper is referenced as: Eren et al. 2013 Methods in Ecology and Evolution. 4,1111-1119. doi: 10.1111/2041-210X.12114. http://onlinelibrary.wiley.com/doi/10.1111/2041-210X.12114/pdf
Package details |
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Author | Alban Ramette |
Maintainer | Alban Ramette <ramette.alban@gmail.com> |
License | GPL-2 |
Version | 1.4 |
Package repository | View on GitHub |
Installation |
Install the latest version of this package by entering the following in R:
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