The package provides R scripts to perform the oligotyping approach (http://oligotyping.org) as a way to exploring microbial patterns through subtle nucleotide variation within 16S rRNA gene tag sequences of closely related taxa. The original oligotype paper is referenced as: Eren et al. 2013 Methods in Ecology and Evolution. 4,1111-1119. doi: 10.1111/2041-210X.12114. http://onlinelibrary.wiley.com/doi/10.1111/2041-210X.12114/pdf
|Maintainer||Alban Ramette <[email protected]>|
|Package repository||View on GitHub|
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