GeneSets: Example Gene Sets
In arcolombo/junk: qusage: Quantitative Set Analysis for Gene Expression
Description
Usage
Source
References
Description
- ISG.geneSet
A vector contains a list of probable ISGs based on Schoggins et al. (Nature, 2011).
- MSIG.geneSet
A list containing a set of vectors representing the MSigDB's Canonical Pathways gene set database.
- BTM.geneSet
A list containing a set of vectors. Each entry describes one of the blood transcription modules (BTMs) from Li et al (Nat Immunol., 2014)
Usage
1
2
3
ISG.geneSet
MSIG.geneSets
BTM.geneSet
Source
http://www.broadinstitute.org/gsea/msigdb/
References
ISG: Schoggins et al. (Nature, 2011).
MSIG: Liberzon et al. (Bioinformatics, 2011)
BTM: Li et al. (Nat Immunol., 2014).
arcolombo/junk documentation built on May 10, 2019, 12:49 p.m.
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Description Usage Source References
Description
- ISG.geneSet
A vector contains a list of probable ISGs based on Schoggins et al. (Nature, 2011).
- MSIG.geneSet
A list containing a set of vectors representing the MSigDB's Canonical Pathways gene set database.
- BTM.geneSet
A list containing a set of vectors. Each entry describes one of the blood transcription modules (BTMs) from Li et al (Nat Immunol., 2014)
Usage
1 2 3 | ISG.geneSet
MSIG.geneSets
BTM.geneSet
|
Source
http://www.broadinstitute.org/gsea/msigdb/
References
ISG: Schoggins et al. (Nature, 2011).
MSIG: Liberzon et al. (Bioinformatics, 2011)
BTM: Li et al. (Nat Immunol., 2014).
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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