TAPseq: TAPseq: R-package to design primers for TAP-seq

In argschwind/TAPseq: Targeted scRNA-seq primer design for TAP-seq

TAPseq: R-package to design primers for TAP-seq

Description

This package provides functions to select transcript isoforms and design PCR primers for TAP-seq.

Installation

In order to use the full functionality, Primer3 and BLAST need to be installed and added to PATH. Furthermore, the primer3_config directory containing important files for Primer3 should be located in the same directory as the primer3_core executable. If this is not practical, all functions interacting with Primer3 have arguments to specify the paths to these files.

For more information on installation see: https://github.com/argschwind/TAPseq.

argschwind/TAPseq documentation built on Feb. 9, 2024, 8:20 p.m.