Man pages for arnederoeck/NanoSatelliteR
QC, plotting, and clustering of tandem repeat segmentation created by NanoSatellite.
| clusters_per_read | Obtain a series of tandem repeat unit clusters per sequencing... |
| extract_centroids | Extract tandem repeat unit squiggle centroids. |
| heatmap_custom | Custom heatmap function |
| load_squiggles | Loads raw squiggle data generated by Signal2chunk.R |
| load_summary | Loads summary files generated by Signal2chunk.R |
| ns_heatmap | Create a heatmap from clustered tandem repeat squiggles. |
| plot_lengths | Wrapper function to plot tandem repeat lengths for multiple... |
| qual_reads | Wrapper function to filter sequencing reads based on distance... |
| summary_qc | Quality control of NanoSatellite delineation and segmentation |
