heatmap_custom: Custom heatmap function

In arnederoeck/NanoSatelliteR: QC, plotting, and clustering of tandem repeat segmentation created by NanoSatellite.

Description

This function is slightly adapted from the base heatmap() function to allow control over the line width of the dendrograms. It is recommended to run ns_heatmap() which incorporates heatmap_custom().

Usage

heatmap_custom(x, Rowv = NULL, Colv = if (symm) "Rowv" else NULL,
  distfun = dist, hclustfun = hclust, reorderfun = function(d, w)
  reorder(d, w), add.expr, symm = FALSE, revC = identical(Colv,
  "Rowv"), scale = c("row", "column", "none"), na.rm = TRUE,
  margins = c(5, 5), ColSideColors, RowSideColors, cexRow = 0.2 +
  1/log10(nr), cexCol = 0.2 + 1/log10(nc), labRow = NULL,
  labCol = NULL, main = NULL, xlab = NULL, ylab = NULL,
  keep.dendro = FALSE, verbose = getOption("verbose"), lwd = 10, ...)

arnederoeck/NanoSatelliteR documentation built on May 6, 2019, 1:35 a.m.