Man pages for arranhamlet/popvac_package
Generate population level vaccination data from a csv template.

add_1940_1950Adds the years 1940 to 1950 to the 2 dimensional dataframe of...
add.vacc.campaignThis adds vaccination campaigns from the generated csv to the...
areacalculatorWorks out the area shared between shapefiles, used to convert...
calc.dosesCalculates the number of doses used from coverage.
calc.new.coverageCalculates the new vaccination coverage based on the old...
calc.new.coverage.vectorizedVectorised version of calc.new.coverage
cleansplitCleans input and divides into GADM1 and GADM2 entries
convert_to_latestConverts GADM version 1 and version 2 campaigns to version...
csv2pl_vaccProccesses the csv created by the function format_csv and...
csv_cleanCleans UN WPP interpolated to single age group data then...
csv_to_adm2popCleans UN WPP interpolated to single age group data then...
format_combGenerates a formatted dataframe of vaccination campaigns from...
format_csvGenerates a formatted dataframe of vaccination campaigns from...
funct
gadm1_adm2gadm1 to gadm2 conversion adm1 data
GADM1prepFormats and prepares GADM1 located vaccination campaigns
GADM2prepFormats and prepares GADM2 located vaccination campaigns
GADMagreeerProcesses GADM1 and GADM2 entries Processes GADM1 and GADm2...
gen_csv_templateThis generates a csv template for vaccination campaigns in...
get_p_prop3dMakes get_p_prop3d from pop3d and P_tot_2d.
get_P_tot_2dMakes P_tot_2d from pop3d.
global_annual_ageGlobal population by age and time
outputerOutput Generates outputs
popandvacGenerates population and vaccination arrays Takes the initial...
popperadm2Populates a cleaned UN WPP interpolated csv at adm2
pop.vaccination-packageGenerate population level vaccination data from a csv...
pull.vc.outExtracts vaccination campaigns
separate.locationsSeparates locations
transform_into_vc3dTransforms the 2d dataframe of vaccination coverage to a 3d...
vacgenGenerates vaccination coverages from cleaned vaccination...
arranhamlet/popvac_package documentation built on June 3, 2017, 10:07 p.m.