chromosomeCoverage: CpG covergae in each chromosome
In aryeelab/scmeth: Functions to conduct quality control analysis in methylation data
Description
Usage
Arguments
Value
Examples
Description
Provides Coverage metrics for each sample by the chromosome
Usage
1
Arguments
bs
bsseq object
Value
matrix of chromsome covergae with
column and rows indicating the samples and the chromosome respectively
Examples
1
2
3
directory <- system.file("extdata/bismark_data",package='scmeth')
bs <- HDF5Array::loadHDF5SummarizedExperiment(directory)
chromosomeCoverage(bs)
aryeelab/scmeth documentation built on June 15, 2019, 8:02 p.m.
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Description Usage Arguments Value Examples
Description
Provides Coverage metrics for each sample by the chromosome
Usage
1 |
Arguments
bs |
bsseq object |
Value
matrix of chromsome covergae with column and rows indicating the samples and the chromosome respectively
Examples
1 2 3 | directory <- system.file("extdata/bismark_data",package='scmeth')
bs <- HDF5Array::loadHDF5SummarizedExperiment(directory)
chromosomeCoverage(bs)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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