Tissue: Three treatments to tissue samples data frame
In asael697/fdaRNA: RNA-Seq and Microarray Preprocessing
Description
Usage
Format
Details
Source
References
Examples
Description
The Tissue data set consists of the study of the tissue, on mice, using three different treatments. It has 3,487 genes and 41 microarrays. Treatment one and two contain each 11 microarrays each and treatment three 19 microarrays. This is raw data.
Usage
1
data("Tissue")
Format
A data frame with 3487 observations on the following 41 variables.
X1a numeric vector
X2a numeric vector
X3a numeric vector
X4a numeric vector
X5a numeric vector
X6a numeric vector
X7a numeric vector
X8a numeric vector
X9a numeric vector
X10a numeric vector
X11a numeric vector
X12a numeric vector
X13a numeric vector
X14a numeric vector
X15a numeric vector
X16a numeric vector
X17a numeric vector
X18a numeric vector
X19a numeric vector
X20a numeric vector
X21a numeric vector
X22a numeric vector
X23a numeric vector
X24a numeric vector
X25a numeric vector
X26a numeric vector
X27a numeric vector
X28a numeric vector
X29a numeric vector
X30a numeric vector
X31a numeric vector
X32a numeric vector
X33a numeric vector
X34a numeric vector
X35a numeric vector
X36a numeric vector
X37a numeric vector
X38a numeric vector
X39a numeric vector
X40a numeric vector
X41a numeric vector
Details
Variables:
Col 1-11: treat1.X1 through treat1.X11. Treatment 1
Col 12-22: treat2.X1 through treat2.X11. Treatment 2
Col 23-41: treat3.X1 through treat3.X19. Treatment 3
Source
Own
References
Amaratunga D, Cabrera J, Shkedy Z. Exploration and analysis of DNA microarray and other high dimensional data. J. Wiley & Sons, 2014.
Nieto-Reyes A, Cabrera J. Statistical depth based normalization and outlier detection of gene expression data. Preprint.
Examples
1
normalization.boxplot(Tissue, before = TRUE, par.r = TRUE)
asael697/fdaRNA documentation built on May 28, 2020, 11:32 a.m.
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Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Description Usage Format Details Source References Examples
Description
The Tissue data set consists of the study of the tissue, on mice, using three different treatments. It has 3,487 genes and 41 microarrays. Treatment one and two contain each 11 microarrays each and treatment three 19 microarrays. This is raw data.
Usage
1 | data("Tissue")
|
Format
A data frame with 3487 observations on the following 41 variables.
X1a numeric vector
X2a numeric vector
X3a numeric vector
X4a numeric vector
X5a numeric vector
X6a numeric vector
X7a numeric vector
X8a numeric vector
X9a numeric vector
X10a numeric vector
X11a numeric vector
X12a numeric vector
X13a numeric vector
X14a numeric vector
X15a numeric vector
X16a numeric vector
X17a numeric vector
X18a numeric vector
X19a numeric vector
X20a numeric vector
X21a numeric vector
X22a numeric vector
X23a numeric vector
X24a numeric vector
X25a numeric vector
X26a numeric vector
X27a numeric vector
X28a numeric vector
X29a numeric vector
X30a numeric vector
X31a numeric vector
X32a numeric vector
X33a numeric vector
X34a numeric vector
X35a numeric vector
X36a numeric vector
X37a numeric vector
X38a numeric vector
X39a numeric vector
X40a numeric vector
X41a numeric vector
Details
Variables:
Col 1-11: treat1.X1 through treat1.X11. Treatment 1
Col 12-22: treat2.X1 through treat2.X11. Treatment 2
Col 23-41: treat3.X1 through treat3.X19. Treatment 3
Source
Own
References
Amaratunga D, Cabrera J, Shkedy Z. Exploration and analysis of DNA microarray and other high dimensional data. J. Wiley & Sons, 2014.
Nieto-Reyes A, Cabrera J. Statistical depth based normalization and outlier detection of gene expression data. Preprint.
Examples
1 | normalization.boxplot(Tissue, before = TRUE, par.r = TRUE)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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