run_edr_date: Run EDR for a single date

In ashiklom/edr-da: ED2 RTM testing functions

Description

Run EDR for a single date

Usage

run_edr_date(
  date,
  ed2in,
  trait_values,
  output_dir = tempdir(),
  pb = NULL,
  img_path = NULL,
  edr_exe_path = file.path("/projectnb/dietzelab/ashiklom", "ED2/EDR/build",
    "ed_2.1-opt")
)

Arguments

date	Date at which to run EDR
ed2in	ED2IN list to use as ED input
trait_values	Named list of trait values
output_dir	Directory where to store outputs
pb	Optional progress bar object
img_path	Path to Singularity container (usually a .simg file)
edr_exe_path	If img_path is NULL, a full path to the EDR executable. Ignored otherwise.

ashiklom/edr-da documentation built on April 16, 2021, 9:33 p.m.