Description Usage Arguments See Also Examples
Plots a heatmap where width and height of each element reflect respective sizes of input FGS and AGS.
1 |
List1 |
AGS or FGS object that lists members of each individual AGS/FGS. |
List2 |
FGS or AGS object that lists members of each individual FGS/AGS. |
Z |
matrix (output of |
Log |
If |
1 2 3 4 5 6 7 8 9 | ags.list <- samples2ags(fantom5.43samples, Ntop=20, method="topnorm")
data(can.sig.go)
fpath <- can.sig.go
fgs.list <- import.gs(fpath)
data(net.kegg)
netpath <- net.kegg
net <- import.net(netpath)
n1 <- nea.render(AGS=ags.list, FGS=fgs.list, NET=net, graph=TRUE)
set.heat(ags.list, fgs.list, n1$z, Log=FALSE)
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