Description Usage Arguments Details Value Author(s) See Also Examples
Uses the mgsa
library to estimate pi
for input to the
ILP
, sequentialRM
, bp
functions.
1 |
I |
incidence matrix, genes as the rows, gene sets as columns |
y |
binary vector, with genes as names, must match rownames(I) |
alpha |
numeric, false positive rate in role model, must be between 0 and 1 |
gamma |
numeric, true positive rate in role model, must be between 0 and 1 |
See ILP
numeric, estimate of p
for input to other Rolemodel functions
Aimee Teo Broman, Zhishi Wang
1 2 3 |
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