API for athchen/PhIPData
Container for PhIP-Seq Experiments
| Global functions | |
|---|---|
| .PhIPData | Man page |
| .checkAssays | Source code |
| .checkCounts | Source code |
| .checkDims | Source code |
| .checkNames | Source code |
| .checkObjectDim | Source code |
| .checkSampleInfo | Source code |
| .createDefaults | Source code |
| .deleteOneAlias | Source code |
| .getOneAlias | Source code |
| .getPeptideNames | Source code |
| .getSampleNames | Source code |
| .onLoad | Source code |
| .tidyAssays | Source code |
| .tidyPeptideInfo | Source code |
| .validPhIPData | Source code |
| PhIPData | Man page Source code |
| PhIPData-class | Man page |
| PhIPData-methods | Man page |
| aliases | Man page |
| assay<-,PhIPData,character-method | Man page |
| assay<-,PhIPData,missing-method | Man page |
| assay<-,PhIPData,numeric-method | Man page |
| assays<-,PhIPData,SimpleList-method | Man page |
| assays<-,PhIPData,list-method | Man page |
| counts,PhIPData-method | Man page |
| counts<-,PhIPData-method | Man page |
| defineBeads | Man page |
| deleteAlias | Man page Source code |
| getAlias | Man page Source code |
| getBeadsName | Man page Source code |
| getLibrary | Man page Source code |
| librarySize | Man page Source code |
| listLibrary | Man page Source code |
| logfc | Man page |
| logfc,PhIPData-method | Man page |
| logfc<- | Man page |
| logfc<-,PhIPData-method | Man page |
| makeLibrary | Man page Source code |
| peptideInfo | Man page |
| peptideInfo,PhIPData-method | Man page |
| peptideInfo<- | Man page |
| peptideInfo<-,PhIPData-method | Man page |
| peptideLibraries | Man page |
| prob | Man page |
| prob,PhIPData-method | Man page |
| prob<- | Man page |
| prob<-,PhIPData-method | Man page |
| propReads | Man page Source code |
| removeLibrary | Man page Source code |
| sampleInfo | Man page |
| sampleInfo,PhIPData-method | Man page |
| sampleInfo<- | Man page |
| sampleInfo<-,PhIPData-method | Man page |
| setAlias | Man page Source code |
| setBeadsName | Man page Source code |
| subsetBeads | Man page Source code |
