context("Atorus Validation")
#' @title Test Cases Code
#' @section Updated By:
#' Ashley Tarasiewicz
#' @section Updated Date:
#' 6/16/2020
library(pharmaRTF)
library(huxtable)
library(testthat)
library(tidyverse)
example_custom_reader <- function(test_number=NULL, ...) {
# Make sure that readxl is installed before
if (suppressWarnings(!require('readxl'))) {
stop("This reader requires the package `readxl`. Install using `install.packages('readxl')")
}
# If a column isn't populated then the type may be guessed wrong so force it
col_types <- c('text', 'text', 'text', 'text')
# pass through arguments from ...
df <- readxl::read_excel(..., col_types=col_types)
# Subset and return that dataframe
df[df$test_number==test_number, !names(df) == 'test_number']
}
vur <- NULL
if(file.exists("~/pharmaRTF/vignettes/Validation/vur_auto.Rds")) vur <- readRDS("~/pharmaRTF/vignettes/Validation/vur_auto.Rds")
test_that('T1',{
# output creation
if(is.null(vur)) {
# dataframe requiring one page of output
ht <- huxtable::huxtable(
column1 = c("Header1", 1:10),
column2 = c("Header2", letters[1:10])
)
test_1 <- pharmaRTF::rtf_doc(ht, list(hf_line("Title")), list(hf_line("Footnote")))
# output rtf for manual review
pharmaRTF::write_rtf(test_1, file='~/pharmaRTF/vignettes/Validation/Test_Case_Code/output/test_1.rtf')
rm(ht)
rm(test_1)
}
# tests
skip_if(is.null(vur))
expect_true(vur[vur$ID == "T1.1", "Response"])
expect_true(vur[vur$ID == "T1.2", "Response"])
})
test_that('T2',{
# output creation
if(is.null(vur)) {
ht <- huxtable::huxtable(
column1 = c("Header1", 1:26),
column2 = c("Header2", letters[1:26])
)
test_2 <- pharmaRTF::rtf_doc(ht, list(hf_line("Title")), list(hf_line("Footnote")))
# output rtf for manual review
pharmaRTF::write_rtf(test_2, file='~/pharmaRTF/vignettes/Validation/Test_Case_Code/output/test_2.rtf')
rm(ht)
rm(test_2)
}
# tests
skip_if(is.null(vur))
expect_true(vur[vur$ID == "T2.1", "Response"])
expect_true(vur[vur$ID == "T2.2", "Response"])
expect_true(vur[vur$ID == "T2.3", "Response"])
})
test_that('T3',{
# output creation
if(is.null(vur)) {
ht <- huxtable::huxtable(
column1 = c("Header1", 1:10),
column2 = c("Header2", letters[1:10])
)
test_3 <- pharmaRTF::rtf_doc(ht)
# output dataframe to check default document level margins
save(test_3, file = "~/pharmaRTF/vignettes/Validation/Test_Case_Code/output/test_3.RData")
# change document level margins to 2,.5,1.5,.25 and output rtf for manual review
pharmaRTF::margins(test_3) <- c(top = 2, bottom = .5, left = 1.5, right = .25)
pharmaRTF::write_rtf(test_3, file='~/pharmaRTF/vignettes/Validation/Test_Case_Code/output/test_3.rtf')
rm(ht)
rm(test_3)
# load output for tests
} else {
load("~/pharmaRTF/vignettes/Validation/Test_Case_Code/output/test_3.RData")
}
# tests
skip_if(is.null(vur))
testthat::expect_equal(c(top=1, bottom=1, left=1, right=1), pharmaRTF::margins(test_3), label = "T3.1")
testthat::expect_true(vur[vur$ID == "T3.2", "Response"])
rm(test_3)
})
test_that('T4',{
# output creation
if(is.null(vur)) {
ht <- huxtable::huxtable(
column1 = c("Header1", 1:10),
column2 = c("Header2", letters[1:10])
)
test_4 <- pharmaRTF::rtf_doc(ht)
# output dataframe to check default document level header and footer heights
save(test_4, file = "~/pharmaRTF/vignettes/Validation/Test_Case_Code/output/test_4.RData")
# change document level header and footer heights to .25,1 and output rtf for manual review
pharmaRTF::header_height(test_4) <- .25
pharmaRTF::footer_height(test_4) <- 1
pharmaRTF::write_rtf(test_4, file='~/pharmaRTF/vignettes/Validation/Test_Case_Code/output/test_4.rtf')
rm(ht)
rm(test_4)
# load output for tests
} else {
load("~/pharmaRTF/vignettes/Validation/Test_Case_Code/output/test_4.RData")
}
# tests
skip_if(is.null(vur))
testthat::expect_true(all.equal(c(.5,.5),
c(pharmaRTF::header_height(test_4),pharmaRTF::header_height(test_4))),
label = "T4.1")
testthat::expect_true(vur[vur$ID == "T4.2", "Response"])
rm(test_4)
})
test_that('T5',{
# output creation
if(is.null(vur)) {
ht <- huxtable::huxtable(
column1 = c("Header1", 1:10),
column2 = c("Header2", letters[1:10])
)
test_5 <- pharmaRTF::rtf_doc(ht)
# output dataframe to check default document level page size
save(test_5, file = "~/pharmaRTF/vignettes/Validation/Test_Case_Code/output/test_5.RData")
# change document level page size to 9,12 and output rtf for manual review
pharmaRTF::pagesize(test_5) <- c(height = 9, width = 12)
pharmaRTF::write_rtf(test_5, file='~/pharmaRTF/vignettes/Validation/Test_Case_Code/output/test_5.rtf')
rm(ht)
rm(test_5)
# load output for tests
} else {
load("~/pharmaRTF/vignettes/Validation/Test_Case_Code/output/test_5.RData")
}
# tests
skip_if(is.null(vur))
testthat::expect_equal(c(width = 11, height = 8.5), pharmaRTF::pagesize(test_5),label = "T5.1")
testthat::expect_true(vur[vur$ID == "T5.2", "Response"])
rm(test_5)
})
test_that('T6',{
# output creation
if(is.null(vur)) {
ht <- huxtable::huxtable(
column1 = c("Header1", 1:10),
column2 = c("Header2", letters[1:10])
)
test_6 <- pharmaRTF::rtf_doc(ht)
# output dataframe to check default document level orientation
save(test_6, file = "~/pharmaRTF/vignettes/Validation/Test_Case_Code/output/test_6.RData")
# change document level orientation to portrait and output rtf for manual review
pharmaRTF::orientation(test_6) <- "portrait"
pharmaRTF::write_rtf(test_6, file='~/pharmaRTF/vignettes/Validation/Test_Case_Code/output/test_6.rtf')
rm(ht)
rm(test_6)
# load output for tests
} else {
load("~/pharmaRTF/vignettes/Validation/Test_Case_Code/output/test_6.RData")
}
# tests
skip_if(is.null(vur))
testthat::expect_equal("landscape",pharmaRTF::orientation(test_6),label = "T6.1")
testthat::expect_true(vur[vur$ID == "T6.2", "Response"])
rm(test_6)
})
test_that('T7',{
# output creation
if(is.null(vur)) {
ht <- huxtable::huxtable(
column1 = c("Header1", 1:10),
column2 = c("Header2", letters[1:10])
)
test_7 <- pharmaRTF::rtf_doc(ht)
# output dataframe to check default document level font size
save(test_7, file = "~/pharmaRTF/vignettes/Validation/Test_Case_Code/output/test_7.RData")
# change document level font size to 14 and output rtf for manual review
pharmaRTF::font_size(test_7) <- 14
pharmaRTF::write_rtf(test_7, file='~/pharmaRTF/vignettes/Validation/Test_Case_Code/output/test_7.rtf')
rm(ht)
rm(test_7)
# load output for tests
} else {
load("~/pharmaRTF/vignettes/Validation/Test_Case_Code/output/test_7.RData")
}
# tests
skip_if(is.null(vur))
testthat::expect_equal(12,pharmaRTF::font_size(test_7), label = "T7.1")
testthat::expect_true(vur[vur$ID == "T7.2", "Response"])
rm(test_7)
})
test_that('T8',{
# output creation
if(is.null(vur)) {
ht <- huxtable::huxtable(
column1 = c("Header1", 1:10),
column2 = c("Header2", letters[1:10])
)
test_8 <- pharmaRTF::rtf_doc(ht)
# output dataframe to check default document level font
save(test_8, file = "~/pharmaRTF/vignettes/Validation/Test_Case_Code/output/test_8.RData")
# change document level font to Comic Sans and output rtf for manual review
pharmaRTF::font(test_8) <- "Comic Sans"
pharmaRTF::write_rtf(test_8, file='~/pharmaRTF/vignettes/Validation/Test_Case_Code/output/test_8.rtf')
rm(ht)
rm(test_8)
# load output for tests
} else {
load("~/pharmaRTF/vignettes/Validation/Test_Case_Code/output/test_8.RData")
}
# tests
skip_if(is.null(vur))
testthat::expect_equal("Courier New",pharmaRTF::font(test_8), label = "T8.1")
testthat::expect_true(vur[vur$ID == "T8.2", "Response"])
rm(test_8)
})
test_that('T9',{
# output creation
if(is.null(vur)) {
ht <- huxtable::huxtable(
column1 = c("Header1", 1:10),
column2 = c("Header2", letters[1:10])
)
test_9 <- pharmaRTF::rtf_doc(ht)
# output dataframe to check default document level header rows
save(test_9, file = "~/pharmaRTF/vignettes/Validation/Test_Case_Code/output/test_9.RData")
# change document level header rows to 2 and output rtf for manual review
pharmaRTF::header_rows(test_9) <- 2
pharmaRTF::write_rtf(test_9, file='~/pharmaRTF/vignettes/Validation/Test_Case_Code/output/test_9.rtf')
rm(ht)
rm(test_9)
# load output for tests
} else {
load("~/pharmaRTF/vignettes/Validation/Test_Case_Code/output/test_9.RData")
}
# tests
skip_if(is.null(vur))
testthat::expect_equal(1,pharmaRTF::header_rows(test_9), label = "T9.1")
testthat::expect_true(vur[vur$ID == "T9.2", "Response"])
rm(test_9)
})
test_that('T10',{
# output creation
if(is.null(vur)) {
ht <- huxtable::huxtable(
column1 = c("Header1", 1:10),
column2 = c("Header2", letters[1:10])
)
test_10 <- pharmaRTF::rtf_doc(ht)
# output dataframe to check default document level column header buffers
save(test_10, file = "~/pharmaRTF/vignettes/Validation/Test_Case_Code/output/test_10.RData")
# change document level column header buffers to 2,1 and output rtf for manual review
pharmaRTF::column_header_buffer(test_10) <- c(top = 2, bottom = 1)
pharmaRTF::write_rtf(test_10, file='~/pharmaRTF/vignettes/Validation/Test_Case_Code/output/test_10.rtf')
rm(ht)
rm(test_10)
# load output for tests
} else {
load("~/pharmaRTF/vignettes/Validation/Test_Case_Code/output/test_10.RData")
}
# tests
skip_if(is.null(vur))
testthat::expect_equal(c(top = 0, bottom = 0),pharmaRTF::column_header_buffer(test_10), label = "T10.1")
testthat::expect_true(vur[vur$ID == "T10.2", "Response"])
rm(test_10)
})
test_that('T11',{
# output creation
if(is.null(vur)) {
ht <- huxtable::huxtable(
column1 = c("Header1", 1:10),
column2 = c("Header2", letters[1:10])
)
test_11 <- pharmaRTF::rtf_doc(ht)
# output dataframe to check default document level ignore cell padding
save(test_11, file = "~/pharmaRTF/vignettes/Validation/Test_Case_Code/output/test_11.RData")
# change document level ignore cell padding to TRUE and output rtf for manual review
pharmaRTF::ignore_cell_padding(test_11) <- TRUE
pharmaRTF::write_rtf(test_11, file='~/pharmaRTF/vignettes/Validation/Test_Case_Code/output/test_11.rtf')
rm(ht)
rm(test_11)
# load output for tests
} else {
load("~/pharmaRTF/vignettes/Validation/Test_Case_Code/output/test_11.RData")
}
# tests
skip_if(is.null(vur))
testthat::expect_equal(FALSE,pharmaRTF::ignore_cell_padding(test_11), label = "T11.1")
testthat::expect_true(vur[vur$ID == "T11.2", "Response"])
rm(test_11)
})
test_that('T12',{
# output creation
if(is.null(vur)) {
ht <- huxtable::huxtable(
column1 = c("Header1", 1:26),
column2 = c("Header2", letters[1:26])
)
# one title and one footnote in the RTF document creation
titles <- list(hf_line("rtf_doc Title 1"))
footnotes <- list(hf_line("rtf_doc Footnote 1"))
test_12 <- pharmaRTF::rtf_doc(ht, titles = titles, footnotes = footnotes)
# output rtf for manual review
pharmaRTF::write_rtf(test_12, file='~/pharmaRTF/vignettes/Validation/Test_Case_Code/output/test_12.rtf')
rm(ht)
rm(titles)
rm(footnotes)
rm(test_12)
}
# tests
skip_if(is.null(vur))
expect_true(vur[vur$ID == "T12.1", "Response"])
})
test_that('T13',{
# output creation
if(is.null(vur)) {
ht <- huxtable::huxtable(
column1 = c("Header1", 1:26),
column2 = c("Header2", letters[1:26])
)
# more than one title and more than one footnote in the RTF document creation
titles <- list(hf_line("rtf_doc Title 1"), hf_line("rtf_doc Title 2"), hf_line("rtf_doc Title 3"))
footnotes <- list(hf_line("rtf_doc Footnote 1"), hf_line("rtf_doc Footnote 2"), hf_line("rtf_doc Footnote 3"))
test_13 <- pharmaRTF::rtf_doc(ht, titles = titles, footnotes = footnotes)
# output rtf for manual review
pharmaRTF::write_rtf(test_13, file='~/pharmaRTF/vignettes/Validation/Test_Case_Code/output/test_13.rtf')
rm(ht)
rm(titles)
rm(footnotes)
rm(test_13)
}
# tests
skip_if(is.null(vur))
expect_true(vur[vur$ID == "T13.1", "Response"])
})
test_that('T14',{
# output creation
if(is.null(vur)) {
ht <- huxtable::huxtable(
column1 = c("Header1", 1:26),
column2 = c("Header2", letters[1:26])
)
# one title and one footnote using add_titles and add_footnotes
test_14 <- pharmaRTF::rtf_doc(ht)
test_14 <- pharmaRTF::add_titles(test_14,hf_line("add_titles Title 1"))
test_14 <- pharmaRTF::add_footnotes(test_14,hf_line("add_footnotes Footnote 1"))
# output rtf for manual review
pharmaRTF::write_rtf(test_14, file='~/pharmaRTF/vignettes/Validation/Test_Case_Code/output/test_14.rtf')
rm(ht)
rm(test_14)
}
# tests
skip_if(is.null(vur))
expect_true(vur[vur$ID == "T14.1", "Response"])
})
test_that('T15',{
# output creation
if(is.null(vur)) {
ht <- huxtable::huxtable(
column1 = c("Header1", 1:26),
column2 = c("Header2", letters[1:26])
)
# more than one title and more than one footnote using add_titles and add_footnotes
test_15 <- pharmaRTF::rtf_doc(ht)
test_15 <- add_titles(test_15,
hf_line("add_titles Title 1"),
hf_line("add_titles Title 2"),
hf_line("add_titles Title 3"))
test_15 <- add_footnotes(test_15,
hf_line("add_footnotes Footnote 1"),
hf_line("add_footnotes Footnote 2"),
hf_line("add_footnotes Footnote 3"))
# output rtf for manual review
pharmaRTF::write_rtf(test_15, file='~/pharmaRTF/vignettes/Validation/Test_Case_Code/output/test_15.rtf')
rm(ht)
rm(test_15)
}
# tests
skip_if(is.null(vur))
expect_true(vur[vur$ID == "T15.1", "Response"])
})
test_that('T16',{
# output creation
if(is.null(vur)) {
ht <- huxtable::huxtable(
column1 = c("Header1", 1:26),
column2 = c("Header2", letters[1:26])
)
# more than one title and more than one footnote in the RTF document creation,
# then replacing the titles and footnotes using add_titles and add_footnotes
titles <- list(hf_line("rtf_doc Title 1"), hf_line("rtf_doc Title 2"), hf_line("rtf_doc Title 3"))
footnotes <- list(hf_line("rtf_doc Footnote 1"), hf_line("rtf_doc Footnote 2"), hf_line("rtf_doc Footnote 3"))
test_16 <- pharmaRTF::rtf_doc(ht, titles = titles, footnotes = footnotes)
test_16 <- add_titles(test_16,
hf_line("add_titles Title 1"),
hf_line("add_titles Title 2"),
hf_line("add_titles Title 3"),replace = TRUE)
test_16 <- add_footnotes(test_16,
hf_line("add_footnotes Footnote 1"),
hf_line("add_footnotes Footnote 2"),
hf_line("add_footnotes Footnote 3"),replace = TRUE)
# output rtf for manual review
pharmaRTF::write_rtf(test_16, file='~/pharmaRTF/vignettes/Validation/Test_Case_Code/output/test_16.rtf')
rm(ht)
rm(titles)
rm(footnotes)
rm(test_16)
}
# tests
skip_if(is.null(vur))
expect_true(vur[vur$ID == "T16.1", "Response"])
})
test_that('T17',{
# output creation
if(is.null(vur)) {
ht <- huxtable::huxtable(
column1 = c("Header1", 1:26),
column2 = c("Header2", letters[1:26])
)
# more than one title and more than one footnote in the RTF document creation,
# then appending the titles and footnotes using add_titles and add_footnotes
titles <- list(hf_line("rtf_doc Title 1"), hf_line("rtf_doc Title 2"), hf_line("rtf_doc Title 3"))
footnotes <- list(hf_line("rtf_doc Footnote 1"), hf_line("rtf_doc Footnote 2"), hf_line("rtf_doc Footnote 3"))
test_17 <- pharmaRTF::rtf_doc(ht, titles = titles, footnotes = footnotes)
test_17 <- add_titles(test_17,
hf_line("add_titles Title 1"),
hf_line("add_titles Title 2"),
hf_line("add_titles Title 3"))
test_17 <- add_footnotes(test_17,
hf_line("add_footnotes Footnote 1"),
hf_line("add_footnotes Footnote 2"),
hf_line("add_footnotes Footnote 3"))
# output rtf for manual review
pharmaRTF::write_rtf(test_17, file='~/pharmaRTF/vignettes/Validation/Test_Case_Code/output/test_17.rtf')
rm(ht)
rm(titles)
rm(footnotes)
rm(test_17)
}
# tests
skip_if(is.null(vur))
expect_true(vur[vur$ID == "T17.1", "Response"])
})
test_that('T18',{
# output creation
if(is.null(vur)) {
ht <- huxtable::huxtable(
column1 = c("Header1", 1:26),
column2 = c("Header2", letters[1:26])
)
# titles and footnotes created by importing from a separate file using from.file of titles_and_footnotes_from_df
test_18 <- pharmaRTF::rtf_doc(ht) %>% pharmaRTF::titles_and_footnotes_from_df(
from.file='~/pharmaRTF/vignettes/Validation/Test_Case_Code/input/titles_footnotes.xlsx',
reader=example_custom_reader,
test_number='T18')
# output rtf for manual review
pharmaRTF::write_rtf(test_18, file='~/pharmaRTF/vignettes/Validation/Test_Case_Code/output/test_18.rtf')
rm(ht)
rm(test_18)
}
# tests
skip_if(is.null(vur))
expect_true(vur[vur$ID == "T18.1", "Response"])
})
test_that('T19',{
# output creation
if(is.null(vur)) {
ht <- huxtable::huxtable(
column1 = c("Header1", 1:26),
column2 = c("Header2", letters[1:26])
)
# titles and footnotes created by importing from a separate file using from.df of titles_and_footnotes_from_df
ts_and_fs <- example_custom_reader('~/pharmaRTF/vignettes/Validation/Test_Case_Code/input/titles_footnotes.xlsx', test_number='T19')
test_19 <- rtf_doc(ht) %>% pharmaRTF::titles_and_footnotes_from_df(from.df=ts_and_fs)
# output rtf for manual review
pharmaRTF::write_rtf(test_19, file='~/pharmaRTF/vignettes/Validation/Test_Case_Code/output/test_19.rtf')
rm(ht)
rm(ts_and_fs)
rm(test_19)
}
# tests
skip_if(is.null(vur))
expect_true(vur[vur$ID == "T19.1", "Response"])
})
test_that('T20',{
# output creation
if(is.null(vur)) {
ht <- huxtable::huxtable(
column1 = c("Header1", 1:26),
column2 = c("Header2", letters[1:26])
)
# titles and footnotes capturing PAGE_FORMAT DATE_FORMAT and FILE_PATH in the RTF document creation
titles <- list(hf_line(c("rtf_doc", "PAGE_FORMAT: Page %s of %s")),
hf_line(c("rtf_doc", "DATE_FORMAT: %H:%M %A, %B %d, %Y")),
hf_line(c("rtf_doc", "FILE_PATH: Source: %s")))
footnotes <- list(hf_line(c("rtf_doc", "PAGE_FORMAT: Page %s")),
hf_line(c("rtf_doc", "DATE_FORMAT: %H:%M %A, %B %d, %Y")),
hf_line(c("rtf_doc", "FILE_PATH: Source: %s")))
test_20 <- pharmaRTF::rtf_doc(ht, titles = titles, footnotes = footnotes)
# output rtf for manual review
pharmaRTF::write_rtf(test_20, file='~/pharmaRTF/vignettes/Validation/Test_Case_Code/output/test_20.rtf')
rm(ht)
rm(titles)
rm(footnotes)
rm(test_20)
}
# tests
skip_if(is.null(vur))
expect_true(vur[vur$ID == "T20.1", "Response"])
})
test_that('T21',{
# output creation
if(is.null(vur)) {
ht <- huxtable::huxtable(
column1 = c("Header1", 1:26),
column2 = c("Header2", letters[1:26])
)
# titles and footnotes capturing PAGE_FORMAT DATE_FORMAT and FILE_PATH using add_titles and add_footnotes
test_21 <- pharmaRTF::rtf_doc(ht)
test_21 <- add_titles(test_21,
hf_line(c("add_titles", "PAGE_FORMAT: Page %s of %s")),
hf_line(c("add_titles", "DATE_FORMAT: %H:%M %A, %B %d, %Y")),
hf_line(c("add_titles", "FILE_PATH: Source: %s")))
test_21 <- add_footnotes(test_21,
hf_line(c("add_footnotes", "PAGE_FORMAT: Page %s")),
hf_line(c("add_footnotes", "DATE_FORMAT: %H:%M %A, %B %d, %Y")),
hf_line(c("add_footnotes", "FILE_PATH: Source: %s")))
# output rtf for manual review
pharmaRTF::write_rtf(test_21, file='~/pharmaRTF/vignettes/Validation/Test_Case_Code/output/test_21.rtf')
rm(ht)
rm(test_21)
}
# tests
skip_if(is.null(vur))
expect_true(vur[vur$ID == "T21.1", "Response"])
})
test_that('T22',{
# output creation
if(is.null(vur)) {
ht <- huxtable::huxtable(
column1 = c("Header1", 1:26),
column2 = c("Header2", letters[1:26])
)
# titles and footnotes capturing PAGE_FORMAT DATE_FORMAT and FILE_PATH imported from a separate file using a reader
test_22 <- pharmaRTF::rtf_doc(ht) %>% pharmaRTF::titles_and_footnotes_from_df(
from.file='~/pharmaRTF/vignettes/Validation/Test_Case_Code/input/titles_footnotes.xlsx',
reader=example_custom_reader,
test_number='T22')
# output rtf for manual review
pharmaRTF::write_rtf(test_22, file='~/pharmaRTF/vignettes/Validation/Test_Case_Code/output/test_22.rtf')
rm(ht)
rm(test_22)
}
# tests
skip_if(is.null(vur))
expect_true(vur[vur$ID == "T22.1", "Response"])
})
test_that('T23',{
# output creation
if(is.null(vur)) {
ht <- huxtable::huxtable(
column1 = c("Header1", 1:26),
column2 = c("Header2", letters[1:26])
)
# titles/footnotes created in the RTF document creation
titles <- list(hf_line("rtf_doc Title 1"), hf_line("rtf_doc Title 2"), hf_line("rtf_doc Title 3"))
footnotes <- list(hf_line("rtf_doc Footnote 1"), hf_line("rtf_doc Footnote 2"), hf_line("rtf_doc Footnote 3"))
test_23 <- pharmaRTF::rtf_doc(ht, titles = titles, footnotes = footnotes)
# output dataframe to check default bold
save(test_23, file = "~/pharmaRTF/vignettes/Validation/Test_Case_Code/output/test_23.RData")
# change some titles/footnotes bold to TRUE and output rtf for manual review
pharmaRTF::bold(test_23$titles[[1]]) <- TRUE
pharmaRTF::bold(test_23$titles[[2]]) <- TRUE
pharmaRTF::bold(test_23$footnotes[[1]]) <- TRUE
pharmaRTF::bold(test_23$footnotes[[3]]) <- TRUE
pharmaRTF::write_rtf(test_23, file='~/pharmaRTF/vignettes/Validation/Test_Case_Code/output/test_23.rtf')
rm(ht)
rm(titles)
rm(footnotes)
rm(test_23)
# load output for tests
} else {
load("~/pharmaRTF/vignettes/Validation/Test_Case_Code/output/test_23.RData")
}
# tests
skip_if(is.null(vur))
testthat::expect_true(all.equal(c(rep(FALSE,6)),
c(pharmaRTF::bold(test_23$titles[[1]]),pharmaRTF::bold(test_23$titles[[2]]),pharmaRTF::bold(test_23$titles[[3]]),
pharmaRTF::bold(test_23$footnotes[[1]]),pharmaRTF::bold(test_23$footnotes[[2]]),pharmaRTF::bold(test_23$footnotes[[3]]))),
label = "T23.1")
expect_true(vur[vur$ID == "T23.2", "Response"])
rm(test_23)
})
test_that('T24',{
# output creation
if(is.null(vur)) {
ht <- huxtable::huxtable(
column1 = c("Header1", 1:26),
column2 = c("Header2", letters[1:26])
)
# titles/footnotes created using add_titles and add_footnotes
test_24 <- pharmaRTF::rtf_doc(ht)
test_24 <- add_titles(test_24,
hf_line("add_titles Title 1"),
hf_line("add_titles Title 2"),
hf_line("add_titles Title 3"))
test_24 <- add_footnotes(test_24,
hf_line("add_footnotes Footnote 1"),
hf_line("add_footnotes Footnote 2"),
hf_line("add_footnotes Footnote 3"))
# output dataframe to check default bold
save(test_24, file = "~/pharmaRTF/vignettes/Validation/Test_Case_Code/output/test_24.RData")
# change some titles/footnotes bold to TRUE and output rtf for manual review
pharmaRTF::bold(test_24$titles[[1]]) <- TRUE
pharmaRTF::bold(test_24$titles[[2]]) <- TRUE
pharmaRTF::bold(test_24$footnotes[[1]]) <- TRUE
pharmaRTF::bold(test_24$footnotes[[3]]) <- TRUE
pharmaRTF::write_rtf(test_24, file='~/pharmaRTF/vignettes/Validation/Test_Case_Code/output/test_24.rtf')
rm(ht)
rm(test_24)
# load output for tests
} else {
load("~/pharmaRTF/vignettes/Validation/Test_Case_Code/output/test_24.RData")
}
# tests
skip_if(is.null(vur))
testthat::expect_true(all.equal(c(rep(FALSE,6)),
c(pharmaRTF::bold(test_24$titles[[1]]),pharmaRTF::bold(test_24$titles[[2]]),pharmaRTF::bold(test_24$titles[[3]]),
pharmaRTF::bold(test_24$footnotes[[1]]),pharmaRTF::bold(test_24$footnotes[[2]]),pharmaRTF::bold(test_24$footnotes[[3]]))),
label = "T24.1")
expect_true(vur[vur$ID == "T24.2", "Response"])
rm(test_24)
})
test_that('T25',{
# output creation
if(is.null(vur)) {
ht <- huxtable::huxtable(
column1 = c("Header1", 1:26),
column2 = c("Header2", letters[1:26])
)
# vtitles/footnotes imported from a separate file using a reader
test_25 <- pharmaRTF::rtf_doc(ht) %>% pharmaRTF::titles_and_footnotes_from_df(
from.file='~/pharmaRTF/vignettes/Validation/Test_Case_Code/input/titles_footnotes.xlsx',
reader=example_custom_reader,
test_number='T25')
# output dataframe to check default bold
save(test_25, file = "~/pharmaRTF/vignettes/Validation/Test_Case_Code/output/test_25.RData")
# change some titles/footnotes bold to TRUE and output rtf for manual review
pharmaRTF::bold(test_25$titles[[1]]) <- TRUE
pharmaRTF::bold(test_25$titles[[2]]) <- TRUE
pharmaRTF::bold(test_25$footnotes[[1]]) <- TRUE
pharmaRTF::bold(test_25$footnotes[[3]]) <- TRUE
pharmaRTF::write_rtf(test_25, file='~/pharmaRTF/vignettes/Validation/Test_Case_Code/output/test_25.rtf')
rm(ht)
rm(test_25)
# load output for tests
} else {
load("~/pharmaRTF/vignettes/Validation/Test_Case_Code/output/test_25.RData")
}
# tests
skip_if(is.null(vur))
testthat::expect_true(all.equal(c(rep(FALSE,6)),
c(pharmaRTF::bold(test_25$titles[[1]]),pharmaRTF::bold(test_25$titles[[2]]),pharmaRTF::bold(test_25$titles[[3]]),
pharmaRTF::bold(test_25$footnotes[[1]]),pharmaRTF::bold(test_25$footnotes[[2]]),pharmaRTF::bold(test_25$footnotes[[3]]))),
label = "T25.1")
expect_true(vur[vur$ID == "T25.2", "Response"])
rm(test_25)
})
test_that('T26',{
# output creation
if(is.null(vur)) {
ht <- huxtable::huxtable(
column1 = c("Header1", 1:26),
column2 = c("Header2", letters[1:26])
)
# titles/footnotes created in the RTF document creation
titles <- list(hf_line("rtf_doc Title 1"), hf_line("rtf_doc Title 2"), hf_line("rtf_doc Title 3"))
footnotes <- list(hf_line("rtf_doc Footnote 1"), hf_line("rtf_doc Footnote 2"), hf_line("rtf_doc Footnote 3"))
test_26 <- pharmaRTF::rtf_doc(ht, titles = titles, footnotes = footnotes)
# output dataframe to check default italic
save(test_26, file = "~/pharmaRTF/vignettes/Validation/Test_Case_Code/output/test_26.RData")
# change some titles/footnotes italic to TRUE and output rtf for manual review
pharmaRTF::italic(test_26$titles[[2]]) <- TRUE
pharmaRTF::italic(test_26$titles[[3]]) <- TRUE
pharmaRTF::italic(test_26$footnotes[[3]]) <- TRUE
pharmaRTF::write_rtf(test_26, file='~/pharmaRTF/vignettes/Validation/Test_Case_Code/output/test_26.rtf')
rm(ht)
rm(titles)
rm(footnotes)
rm(test_26)
# load output for tests
} else {
load("~/pharmaRTF/vignettes/Validation/Test_Case_Code/output/test_26.RData")
}
# tests
skip_if(is.null(vur))
testthat::expect_true(all.equal(c(rep(FALSE,6)),
c(pharmaRTF::italic(test_26$titles[[1]]),pharmaRTF::italic(test_26$titles[[2]]),pharmaRTF::italic(test_26$titles[[3]]),
pharmaRTF::italic(test_26$footnotes[[1]]),pharmaRTF::italic(test_26$footnotes[[2]]),pharmaRTF::italic(test_26$footnotes[[3]]))),
label = "T26.1")
expect_true(vur[vur$ID == "T26.2", "Response"])
rm(test_26)
})
test_that('T27',{
# output creation
if(is.null(vur)) {
ht <- huxtable::huxtable(
column1 = c("Header1", 1:26),
column2 = c("Header2", letters[1:26])
)
# titles/footnotes created using add_titles and add_footnotes
test_27 <- pharmaRTF::rtf_doc(ht)
test_27 <- add_titles(test_27,
hf_line("add_titles Title 1"),
hf_line("add_titles Title 2"),
hf_line("add_titles Title 3"))
test_27 <- add_footnotes(test_27,
hf_line("add_footnotes Footnote 1"),
hf_line("add_footnotes Footnote 2"),
hf_line("add_footnotes Footnote 3"))
# output dataframe to check default italic
save(test_27, file = "~/pharmaRTF/vignettes/Validation/Test_Case_Code/output/test_27.RData")
# change some titles/footnotes italic to TRUE and output rtf for manual review
pharmaRTF::italic(test_27$titles[[2]]) <- TRUE
pharmaRTF::italic(test_27$titles[[3]]) <- TRUE
pharmaRTF::italic(test_27$footnotes[[3]]) <- TRUE
pharmaRTF::write_rtf(test_27, file='~/pharmaRTF/vignettes/Validation/Test_Case_Code/output/test_27.rtf')
rm(ht)
rm(test_27)
# load output for tests
} else {
load("~/pharmaRTF/vignettes/Validation/Test_Case_Code/output/test_27.RData")
}
# tests
skip_if(is.null(vur))
testthat::expect_true(all.equal(c(rep(FALSE,6)),
c(pharmaRTF::italic(test_27$titles[[1]]),pharmaRTF::italic(test_27$titles[[2]]),pharmaRTF::italic(test_27$titles[[3]]),
pharmaRTF::italic(test_27$footnotes[[1]]),pharmaRTF::italic(test_27$footnotes[[2]]),pharmaRTF::italic(test_27$footnotes[[3]]))),
label = "T27.1")
expect_true(vur[vur$ID == "T27.2", "Response"])
rm(test_27)
})
test_that('T28',{
# output creation
if(is.null(vur)) {
ht <- huxtable::huxtable(
column1 = c("Header1", 1:26),
column2 = c("Header2", letters[1:26])
)
# titles/footnotes imported from a separate file using a reader
test_28 <- pharmaRTF::rtf_doc(ht) %>% pharmaRTF::titles_and_footnotes_from_df(
from.file='~/pharmaRTF/vignettes/Validation/Test_Case_Code/input/titles_footnotes.xlsx',
reader=example_custom_reader,
test_number='T28')
# output dataframe to check default italic
save(test_28, file = "~/pharmaRTF/vignettes/Validation/Test_Case_Code/output/test_28.RData")
# change some titles/footnotes italic to TRUE and output rtf for manual review
pharmaRTF::italic(test_28$titles[[2]]) <- TRUE
pharmaRTF::italic(test_28$titles[[3]]) <- TRUE
pharmaRTF::italic(test_28$footnotes[[3]]) <- TRUE
pharmaRTF::write_rtf(test_28, file='~/pharmaRTF/vignettes/Validation/Test_Case_Code/output/test_28.rtf')
rm(ht)
rm(test_28)
# load output for tests
} else {
load("~/pharmaRTF/vignettes/Validation/Test_Case_Code/output/test_28.RData")
}
# tests
skip_if(is.null(vur))
testthat::expect_true(all.equal(c(rep(FALSE,6)),
c(pharmaRTF::italic(test_28$titles[[1]]),pharmaRTF::italic(test_28$titles[[2]]),pharmaRTF::italic(test_28$titles[[3]]),
pharmaRTF::italic(test_28$footnotes[[1]]),pharmaRTF::italic(test_28$footnotes[[2]]),pharmaRTF::italic(test_28$footnotes[[3]]))),
label = "T28.1")
expect_true(vur[vur$ID == "T28.2", "Response"])
rm(test_28)
})
test_that('T29',{
# output creation
if(is.null(vur)) {
ht <- huxtable::huxtable(
column1 = c("Header1", 1:26),
column2 = c("Header2", letters[1:26])
)
# titles/footnotes created in the RTF document creation
titles <- list(hf_line("rtf_doc Title 1"), hf_line("rtf_doc Title 2"), hf_line("rtf_doc Title 3"))
footnotes <- list(hf_line("rtf_doc Footnote 1"), hf_line("rtf_doc Footnote 2"), hf_line("rtf_doc Footnote 3 Part 1", "rtf_doc Footnote 3 Part 2"))
test_29 <- pharmaRTF::rtf_doc(ht, titles = titles, footnotes = footnotes)
# output dataframe to check default align
save(test_29, file = "~/pharmaRTF/vignettes/Validation/Test_Case_Code/output/test_29.RData")
# change some titles/footnotes align and output rtf for manual review
pharmaRTF::align(test_29$titles[[1]]) <- "left"
pharmaRTF::align(test_29$titles[[2]]) <- "right"
pharmaRTF::align(test_29$footnotes[[1]]) <- "left"
pharmaRTF::align(test_29$footnotes[[2]]) <- "left"
pharmaRTF::align(test_29$footnotes[[3]]) <- "split"
pharmaRTF::write_rtf(test_29, file='~/pharmaRTF/vignettes/Validation/Test_Case_Code/output/test_29.rtf')
rm(ht)
rm(titles)
rm(footnotes)
rm(test_29)
# load output for tests
} else {
load("~/pharmaRTF/vignettes/Validation/Test_Case_Code/output/test_29.RData")
}
# tests
skip_if(is.null(vur))
testthat::expect_true(all.equal(c(rep("center",6)),
c(pharmaRTF::align(test_29$titles[[1]]),pharmaRTF::align(test_29$titles[[2]]),pharmaRTF::align(test_29$titles[[3]]),
pharmaRTF::align(test_29$footnotes[[1]]),pharmaRTF::align(test_29$footnotes[[2]]),pharmaRTF::align(test_29$footnotes[[3]]))),
label = "T29.1")
expect_true(vur[vur$ID == "T29.2", "Response"])
rm(test_29)
})
test_that('T30',{
# output creation
if(is.null(vur)) {
ht <- huxtable::huxtable(
column1 = c("Header1", 1:26),
column2 = c("Header2", letters[1:26])
)
# titles/footnotes created using add_titles and add_footnotes
test_30 <- pharmaRTF::rtf_doc(ht)
test_30 <- add_titles(test_30,
hf_line("add_titles Title 1"),
hf_line("add_titles Title 2"),
hf_line("add_titles Title 3"))
test_30 <- add_footnotes(test_30,
hf_line("add_footnotes Footnote 1"),
hf_line("add_footnotes Footnote 2"),
hf_line(c("add_footnotes Footnote 3 Part 1", "add_footnotes Footnote 3 Part 2")))
# output dataframe to check default align
save(test_30, file = "~/pharmaRTF/vignettes/Validation/Test_Case_Code/output/test_30.RData")
# change some titles/footnotes align and output rtf for manual review
pharmaRTF::align(test_30$titles[[1]]) <- "left"
pharmaRTF::align(test_30$titles[[2]]) <- "right"
pharmaRTF::align(test_30$footnotes[[1]]) <- "left"
pharmaRTF::align(test_30$footnotes[[2]]) <- "left"
pharmaRTF::align(test_30$footnotes[[3]]) <- "split"
pharmaRTF::write_rtf(test_30, file='~/pharmaRTF/vignettes/Validation/Test_Case_Code/output/test_30.rtf')
rm(ht)
rm(test_30)
# load output for tests
} else {
load("~/pharmaRTF/vignettes/Validation/Test_Case_Code/output/test_30.RData")
}
# tests
skip_if(is.null(vur))
testthat::expect_true(all.equal(c(rep("center",6)),
c(pharmaRTF::align(test_30$titles[[1]]),pharmaRTF::align(test_30$titles[[2]]),pharmaRTF::align(test_30$titles[[3]]),
pharmaRTF::align(test_30$footnotes[[1]]),pharmaRTF::align(test_30$footnotes[[2]]),pharmaRTF::align(test_30$footnotes[[3]]))),
label = "T30.1")
expect_true(vur[vur$ID == "T30.2", "Response"])
rm(test_30)
})
test_that('T31',{
# output creation
if(is.null(vur)) {
ht <- huxtable::huxtable(
column1 = c("Header1", 1:26),
column2 = c("Header2", letters[1:26])
)
# titles/footnotes imported from a separate file using a reader
test_31 <- pharmaRTF::rtf_doc(ht) %>% pharmaRTF::titles_and_footnotes_from_df(
from.file='~/pharmaRTF/vignettes/Validation/Test_Case_Code/input/titles_footnotes.xlsx',
reader=example_custom_reader,
test_number='T31')
# output dataframe to check default align
save(test_31, file = "~/pharmaRTF/vignettes/Validation/Test_Case_Code/output/test_31.RData")
# change some titles/footnotes align and output rtf for manual review
pharmaRTF::align(test_31$titles[[1]]) <- "left"
pharmaRTF::align(test_31$titles[[2]]) <- "right"
pharmaRTF::align(test_31$footnotes[[1]]) <- "left"
pharmaRTF::align(test_31$footnotes[[2]]) <- "left"
pharmaRTF::align(test_31$footnotes[[3]]) <- "split"
pharmaRTF::write_rtf(test_31, file='~/pharmaRTF/vignettes/Validation/Test_Case_Code/output/test_31.rtf')
rm(ht)
rm(test_31)
# load output for tests
} else {
load("~/pharmaRTF/vignettes/Validation/Test_Case_Code/output/test_31.RData")
}
# tests
skip_if(is.null(vur))
testthat::expect_true(all.equal(c(rep("center",6)),
c(pharmaRTF::align(test_31$titles[[1]]),pharmaRTF::align(test_31$titles[[2]]),pharmaRTF::align(test_31$titles[[3]]),
pharmaRTF::align(test_31$footnotes[[1]]),pharmaRTF::align(test_31$footnotes[[2]]),pharmaRTF::align(test_31$footnotes[[3]]))),
label = "T31.1")
expect_true(vur[vur$ID == "T31.2", "Response"])
rm(test_31)
})
test_that('T32',{
# output creation
if(is.null(vur)) {
ht <- huxtable::huxtable(
column1 = c("Header1", 1:26),
column2 = c("Header2", letters[1:26])
)
# titles/footnotes created in the RTF document creation
titles <- list(hf_line("rtf_doc Title 1"), hf_line("rtf_doc Title 2"), hf_line("rtf_doc Title 3"))
footnotes <- list(hf_line("rtf_doc Footnote 1"), hf_line("rtf_doc Footnote 2"), hf_line("rtf_doc Footnote 3"))
test_32 <- pharmaRTF::rtf_doc(ht, titles = titles, footnotes = footnotes)
# output dataframe to check default font
save(test_32, file = "~/pharmaRTF/vignettes/Validation/Test_Case_Code/output/test_32.RData")
# change some titles/footnotes font to Comic Sans and output rtf for manual review
pharmaRTF::font(test_32$titles[[1]]) <- "Comic Sans"
pharmaRTF::font(test_32$titles[[2]]) <- "Comic Sans"
pharmaRTF::font(test_32$footnotes[[1]]) <- "Comic Sans"
pharmaRTF::font(test_32$footnotes[[3]]) <- "Comic Sans"
pharmaRTF::write_rtf(test_32, file='~/pharmaRTF/vignettes/Validation/Test_Case_Code/output/test_32.rtf')
rm(ht)
rm(titles)
rm(footnotes)
rm(test_32)
# load output for tests
} else {
load("~/pharmaRTF/vignettes/Validation/Test_Case_Code/output/test_32.RData")
}
# tests
skip_if(is.null(vur))
testthat::expect_true(all.equal(c(rep(NA,6)),
c(pharmaRTF::font(test_32$titles[[1]]),pharmaRTF::font(test_32$titles[[2]]),pharmaRTF::font(test_32$titles[[3]]),
pharmaRTF::font(test_32$footnotes[[1]]),pharmaRTF::font(test_32$footnotes[[2]]),pharmaRTF::font(test_32$footnotes[[3]]))),
label = "T32.1")
expect_true(vur[vur$ID == "T32.2", "Response"])
rm(test_32)
})
test_that('T33',{
# output creation
if(is.null(vur)) {
ht <- huxtable::huxtable(
column1 = c("Header1", 1:26),
column2 = c("Header2", letters[1:26])
)
# titles/footnotes created using add_titles and add_footnotes
test_33 <- pharmaRTF::rtf_doc(ht)
test_33 <- add_titles(test_33,
hf_line("add_titles Title 1"),
hf_line("add_titles Title 2"),
hf_line("add_titles Title 3"))
test_33 <- add_footnotes(test_33,
hf_line("add_footnotes Footnote 1"),
hf_line("add_footnotes Footnote 2"),
hf_line("add_footnotes Footnote 3"))
# output dataframe to check default font
save(test_33, file = "~/pharmaRTF/vignettes/Validation/Test_Case_Code/output/test_33.RData")
# change some titles/footnotes font to Comic Sans and output rtf for manual review
pharmaRTF::font(test_33$titles[[1]]) <- "Comic Sans"
pharmaRTF::font(test_33$titles[[2]]) <- "Comic Sans"
pharmaRTF::font(test_33$footnotes[[1]]) <- "Comic Sans"
pharmaRTF::font(test_33$footnotes[[3]]) <- "Comic Sans"
pharmaRTF::write_rtf(test_33, file='~/pharmaRTF/vignettes/Validation/Test_Case_Code/output/test_33.rtf')
rm(ht)
rm(test_33)
# load output for tests
} else {
load("~/pharmaRTF/vignettes/Validation/Test_Case_Code/output/test_33.RData")
}
# tests
skip_if(is.null(vur))
testthat::expect_true(all.equal(c(rep(NA,6)),
c(pharmaRTF::font(test_33$titles[[1]]),pharmaRTF::font(test_33$titles[[2]]),pharmaRTF::font(test_33$titles[[3]]),
pharmaRTF::font(test_33$footnotes[[1]]),pharmaRTF::font(test_33$footnotes[[2]]),pharmaRTF::font(test_33$footnotes[[3]]))),
label = "T33.1")
expect_true(vur[vur$ID == "T33.2", "Response"])
rm(test_33)
})
test_that('T34',{
# output creation
if(is.null(vur)) {
ht <- huxtable::huxtable(
column1 = c("Header1", 1:26),
column2 = c("Header2", letters[1:26])
)
# titles/footnotes imported from a separate file using a reader
test_34 <- pharmaRTF::rtf_doc(ht) %>% pharmaRTF::titles_and_footnotes_from_df(
from.file='~/pharmaRTF/vignettes/Validation/Test_Case_Code/input/titles_footnotes.xlsx',
reader=example_custom_reader,
test_number='T34')
# output dataframe to check default font
save(test_34, file = "~/pharmaRTF/vignettes/Validation/Test_Case_Code/output/test_34.RData")
# change some titles/footnotes font to Comic Sans and output rtf for manual review
pharmaRTF::font(test_34$titles[[1]]) <- "Comic Sans"
pharmaRTF::font(test_34$titles[[2]]) <- "Comic Sans"
pharmaRTF::font(test_34$footnotes[[1]]) <- "Comic Sans"
pharmaRTF::font(test_34$footnotes[[3]]) <- "Comic Sans"
pharmaRTF::write_rtf(test_34, file='~/pharmaRTF/vignettes/Validation/Test_Case_Code/output/test_34.rtf')
rm(ht)
rm(test_34)
# load output for tests
} else {
load("~/pharmaRTF/vignettes/Validation/Test_Case_Code/output/test_34.RData")
}
# tests
skip_if(is.null(vur))
testthat::expect_true(all.equal(c(rep(as.character(NA),6)),
c(pharmaRTF::font(test_34$titles[[1]]),pharmaRTF::font(test_34$titles[[2]]),pharmaRTF::font(test_34$titles[[3]]),
pharmaRTF::font(test_34$footnotes[[1]]),pharmaRTF::font(test_34$footnotes[[2]]),pharmaRTF::font(test_34$footnotes[[3]]))),
label = "T34.1")
expect_true(vur[vur$ID == "T34.2", "Response"])
rm(test_34)
})
test_that('T35',{
# output creation
if(is.null(vur)) {
ht <- huxtable::huxtable(
column1 = c("Header1", 1:26),
column2 = c("Header2", letters[1:26])
)
# titles/footnotes created in the RTF document creation
titles <- list(hf_line("rtf_doc Title 1"), hf_line("rtf_doc Title 2"), hf_line("rtf_doc Title 3"))
footnotes <- list(hf_line("rtf_doc Footnote 1"), hf_line("rtf_doc Footnote 2"), hf_line("rtf_doc Footnote 3"))
test_35 <- pharmaRTF::rtf_doc(ht, titles = titles, footnotes = footnotes)
# output dataframe to check default font size
save(test_35, file = "~/pharmaRTF/vignettes/Validation/Test_Case_Code/output/test_35.RData")
# change some titles/footnotes font size and output rtf for manual review
pharmaRTF::font_size(test_35$titles[[2]]) <- 14
pharmaRTF::font_size(test_35$titles[[3]]) <- 10
pharmaRTF::font_size(test_35$footnotes[[1]]) <- 30
pharmaRTF::write_rtf(test_35, file='~/pharmaRTF/vignettes/Validation/Test_Case_Code/output/test_35.rtf')
rm(ht)
rm(titles)
rm(footnotes)
rm(test_35)
# load output for tests
} else {
load("~/pharmaRTF/vignettes/Validation/Test_Case_Code/output/test_35.RData")
}
# tests
skip_if(is.null(vur))
testthat::expect_true(all.equal(c(rep(NA,6)),
c(pharmaRTF::font_size(test_35$titles[[1]]),pharmaRTF::font_size(test_35$titles[[2]]),pharmaRTF::font_size(test_35$titles[[3]]),
pharmaRTF::font_size(test_35$footnotes[[1]]),pharmaRTF::font_size(test_35$footnotes[[2]]),pharmaRTF::font_size(test_35$footnotes[[3]]))),
label = "T35.1")
expect_true(vur[vur$ID == "T35.2", "Response"])
rm(test_35)
})
test_that('T36',{
# output creation
if(is.null(vur)) {
ht <- huxtable::huxtable(
column1 = c("Header1", 1:26),
column2 = c("Header2", letters[1:26])
)
# titles/footnotes created using add_titles and add_footnotes
test_36 <- pharmaRTF::rtf_doc(ht)
test_36 <- add_titles(test_36,
hf_line("add_titles Title 1"),
hf_line("add_titles Title 2"),
hf_line("add_titles Title 3"))
test_36 <- add_footnotes(test_36,
hf_line("add_footnotes Footnote 1"),
hf_line("add_footnotes Footnote 2"),
hf_line("add_footnotes Footnote 3"))
# output dataframe to check default font size
save(test_36, file = "~/pharmaRTF/vignettes/Validation/Test_Case_Code/output/test_36.RData")
# change some titles/footnotes font size and output rtf for manual review
pharmaRTF::font_size(test_36$titles[[2]]) <- 14
pharmaRTF::font_size(test_36$titles[[3]]) <- 10
pharmaRTF::font_size(test_36$footnotes[[1]]) <- 30
pharmaRTF::write_rtf(test_36, file='~/pharmaRTF/vignettes/Validation/Test_Case_Code/output/test_36.rtf')
rm(ht)
rm(test_36)
# load output for tests
} else {
load("~/pharmaRTF/vignettes/Validation/Test_Case_Code/output/test_36.RData")
}
# tests
skip_if(is.null(vur))
testthat::expect_true(all.equal(c(rep(NA,6)),
c(pharmaRTF::font_size(test_36$titles[[1]]),pharmaRTF::font_size(test_36$titles[[2]]),pharmaRTF::font_size(test_36$titles[[3]]),
pharmaRTF::font_size(test_36$footnotes[[1]]),pharmaRTF::font_size(test_36$footnotes[[2]]),pharmaRTF::font_size(test_36$footnotes[[3]]))),
label = "T36.1")
expect_true(vur[vur$ID == "T36.2", "Response"])
rm(test_36)
})
test_that('T37',{
# output creation
if(is.null(vur)) {
ht <- huxtable::huxtable(
column1 = c("Header1", 1:26),
column2 = c("Header2", letters[1:26])
)
# titles/footnotes imported from a separate file using a reader
test_37 <- pharmaRTF::rtf_doc(ht) %>% pharmaRTF::titles_and_footnotes_from_df(
from.file='~/pharmaRTF/vignettes/Validation/Test_Case_Code/input/titles_footnotes.xlsx',
reader=example_custom_reader,
test_number='T37')
# output dataframe to check default font size
save(test_37, file = "~/pharmaRTF/vignettes/Validation/Test_Case_Code/output/test_37.RData")
# change some titles/footnotes font size and output rtf for manual review
pharmaRTF::font_size(test_37$titles[[2]]) <- 14
pharmaRTF::font_size(test_37$titles[[3]]) <- 10
pharmaRTF::font_size(test_37$footnotes[[1]]) <- 30
pharmaRTF::write_rtf(test_37, file='~/pharmaRTF/vignettes/Validation/Test_Case_Code/output/test_37.rtf')
rm(ht)
rm(test_37)
# load output for tests
} else {
load("~/pharmaRTF/vignettes/Validation/Test_Case_Code/output/test_37.RData")
}
# tests
skip_if(is.null(vur))
testthat::expect_true(all.equal(c(rep(NA,6)),
c(pharmaRTF::font_size(test_37$titles[[1]]),pharmaRTF::font_size(test_37$titles[[2]]),pharmaRTF::font_size(test_37$titles[[3]]),
pharmaRTF::font_size(test_37$footnotes[[1]]),pharmaRTF::font_size(test_37$footnotes[[2]]),pharmaRTF::font_size(test_37$footnotes[[3]]))),
label = "T37.1")
expect_true(vur[vur$ID == "T37.2", "Response"])
rm(test_37)
})
test_that('T38',{
# output creation
if(is.null(vur)) {
ht <- huxtable::huxtable(
column1 = c("Header1", 1:26),
column2 = c("Header2", letters[1:26])
)
# titles/footnotes created in the RTF document creation
titles <- list(hf_line("rtf_doc Title 1"), hf_line("rtf_doc Title 2"), hf_line("rtf_doc Title 3"))
footnotes <- list(hf_line("rtf_doc Footnote 1"), hf_line("rtf_doc Footnote 2"), hf_line("rtf_doc Footnote 3"))
test_38 <- pharmaRTF::rtf_doc(ht, titles = titles, footnotes = footnotes)
# output dataframe to check default index
save(test_38, file = "~/pharmaRTF/vignettes/Validation/Test_Case_Code/output/test_38.RData")
# change some index and output rtf for manual review
pharmaRTF::index(test_38$titles[[2]]) <- 2
pharmaRTF::index(test_38$titles[[3]]) <- 1
pharmaRTF::index(test_38$footnotes[[1]]) <- 3
pharmaRTF::index(test_38$footnotes[[2]]) <- 1
pharmaRTF::index(test_38$footnotes[[3]]) <- 2
pharmaRTF::write_rtf(test_38, file='~/pharmaRTF/vignettes/Validation/Test_Case_Code/output/test_38.rtf')
rm(ht)
rm(titles)
rm(footnotes)
rm(test_38)
# load output for tests
} else {
load("~/pharmaRTF/vignettes/Validation/Test_Case_Code/output/test_38.RData")
}
# tests
skip_if(is.null(vur))
testthat::expect_true(all.equal(c(rep(NA,6)),
c(pharmaRTF::index(test_38$titles[[1]]),pharmaRTF::index(test_38$titles[[2]]),pharmaRTF::index(test_38$titles[[3]]),
pharmaRTF::index(test_38$footnotes[[1]]),pharmaRTF::index(test_38$footnotes[[2]]),pharmaRTF::index(test_38$footnotes[[3]]))),
label = "T38.1")
expect_true(vur[vur$ID == "T38.2", "Response"])
rm(test_38)
})
test_that('T39',{
# output creation
if(is.null(vur)) {
ht <- huxtable::huxtable(
column1 = c("Header1", 1:26),
column2 = c("Header2", letters[1:26])
)
# titles/footnotes created using add_titles and add_footnotes
test_39 <- pharmaRTF::rtf_doc(ht)
test_39 <- add_titles(test_39,
hf_line("add_titles Title 1"),
hf_line("add_titles Title 2"),
hf_line("add_titles Title 3"))
test_39 <- add_footnotes(test_39,
hf_line("add_footnotes Footnote 1"),
hf_line("add_footnotes Footnote 2"),
hf_line("add_footnotes Footnote 3"))
# output dataframe to check default index
save(test_39, file = "~/pharmaRTF/vignettes/Validation/Test_Case_Code/output/test_39.RData")
# change some index and output rtf for manual review
pharmaRTF::index(test_39$titles[[2]]) <- 2
pharmaRTF::index(test_39$titles[[3]]) <- 1
pharmaRTF::index(test_39$footnotes[[1]]) <- 3
pharmaRTF::index(test_39$footnotes[[2]]) <- 1
pharmaRTF::index(test_39$footnotes[[3]]) <- 2
pharmaRTF::write_rtf(test_39, file='~/pharmaRTF/vignettes/Validation/Test_Case_Code/output/test_39.rtf')
rm(ht)
rm(test_39)
# load output for tests
} else {
load("~/pharmaRTF/vignettes/Validation/Test_Case_Code/output/test_39.RData")
}
# tests
skip_if(is.null(vur))
testthat::expect_true(all.equal(c(rep(NA,6)),
c(pharmaRTF::index(test_39$titles[[1]]),pharmaRTF::index(test_39$titles[[2]]),pharmaRTF::index(test_39$titles[[3]]),
pharmaRTF::index(test_39$footnotes[[1]]),pharmaRTF::index(test_39$footnotes[[2]]),pharmaRTF::index(test_39$footnotes[[3]]))),
label = "T39.1")
expect_true(vur[vur$ID == "T39.2", "Response"])
rm(test_39)
})
test_that('T40',{
# output creation
if(is.null(vur)) {
ht <- huxtable::huxtable(
column1 = c("Header1", 1:26),
column2 = c("Header2", letters[1:26])
)
# titles/footnotes imported from a separate file using a reader
test_40 <- pharmaRTF::rtf_doc(ht) %>% pharmaRTF::titles_and_footnotes_from_df(
from.file='~/pharmaRTF/vignettes/Validation/Test_Case_Code/input/titles_footnotes.xlsx',
reader=example_custom_reader,
test_number='T40')
# output dataframe to check default index
save(test_40, file = "~/pharmaRTF/vignettes/Validation/Test_Case_Code/output/test_40.RData")
# change some index and output rtf for manual review
pharmaRTF::index(test_40$titles[[2]]) <- 2
pharmaRTF::index(test_40$titles[[3]]) <- 1
pharmaRTF::index(test_40$footnotes[[1]]) <- 3
pharmaRTF::index(test_40$footnotes[[2]]) <- 1
pharmaRTF::index(test_40$footnotes[[3]]) <- 2
pharmaRTF::write_rtf(test_40, file='~/pharmaRTF/vignettes/Validation/Test_Case_Code/output/test_40.rtf')
rm(ht)
rm(test_40)
# load output for tests
} else {
load("~/pharmaRTF/vignettes/Validation/Test_Case_Code/output/test_40.RData")
}
# tests
skip_if(is.null(vur))
testthat::expect_true(all.equal(c(rep(NA,6)),
c(pharmaRTF::index(test_40$titles[[1]]),pharmaRTF::index(test_40$titles[[2]]),pharmaRTF::index(test_40$titles[[3]]),
pharmaRTF::index(test_40$footnotes[[1]]),pharmaRTF::index(test_40$footnotes[[2]]),pharmaRTF::index(test_40$footnotes[[3]]))),
label = "T40.1")
expect_true(vur[vur$ID == "T40.2", "Response"])
rm(test_40)
})
test_that('T41',{
# output creation
if(is.null(vur)) {
ht <- huxtable::huxtable(
column1 = c("Header1", 1:26),
column2 = c("Header2", letters[1:26])
)
# create title in the RTF document creation then change title attributes
titles <- list(hf_line("rtf_doc Title 1"))
test_41 <- pharmaRTF::rtf_doc(ht, titles = titles)
pharmaRTF::bold(test_41$titles[[1]]) <- TRUE
pharmaRTF::italic(test_41$titles[[1]]) <- TRUE
pharmaRTF::align(test_41$titles[[1]]) <- "right"
pharmaRTF::font(test_41$titles[[1]]) <- "Comic Sans"
pharmaRTF::font_size(test_41$titles[[1]]) <- 13
pharmaRTF::index(test_41$titles[[1]]) <- 4
# view titles and output to check changes
view_test_41 <- view_titles(test_41)
save(view_test_41, file = "~/pharmaRTF/vignettes/Validation/Test_Case_Code/output/view_test_41.RData")
rm(ht)
rm(titles)
rm(test_41)
rm(view_test_41)
# load output for tests
} else {
load("~/pharmaRTF/vignettes/Validation/Test_Case_Code/output/view_test_41.RData")
}
# tests
skip_if(is.null(vur))
testthat::expect_true(all.equal(c(TRUE, TRUE,"right","Comic Sans",13,4),
c(view_test_41$bold[[1]],view_test_41$italic[[1]],view_test_41$align[[1]],
view_test_41$font[[1]],view_test_41$font_size[[1]],view_test_41$index[[1]])),
label = "T41.1")
rm(view_test_41)
})
test_that('T42',{
# output creation
if(is.null(vur)) {
ht <- huxtable::huxtable(
column1 = c("Header1", 1:26),
column2 = c("Header2", letters[1:26])
)
# create footnote in the RTF document creation then change footnote attributes
footnotes <- list(hf_line("rtf_doc Footnote 1"))
test_42 <- pharmaRTF::rtf_doc(ht, footnotes = footnotes)
pharmaRTF::bold(test_42$footnotes[[1]]) <- TRUE
pharmaRTF::italic(test_42$footnotes[[1]]) <- TRUE
pharmaRTF::align(test_42$footnotes[[1]]) <- "right"
pharmaRTF::font(test_42$footnotes[[1]]) <- "Comic Sans"
pharmaRTF::font_size(test_42$footnotes[[1]]) <- 13
pharmaRTF::index(test_42$footnotes[[1]]) <- 4
# view footnotes and output to check changes
view_test_42 <- view_footnotes(test_42)
save(view_test_42, file = "~/pharmaRTF/vignettes/Validation/Test_Case_Code/output/view_test_42.RData")
rm(ht)
rm(footnotes)
rm(test_42)
rm(view_test_42)
# load output for tests
} else {
load("~/pharmaRTF/vignettes/Validation/Test_Case_Code/output/view_test_42.RData")
}
# tests
skip_if(is.null(vur))
testthat::expect_true(all.equal(c(TRUE, TRUE,"right","Comic Sans",13,4),
c(view_test_42$bold[[1]],view_test_42$italic[[1]],view_test_42$align[[1]],
view_test_42$font[[1]],view_test_42$font_size[[1]],view_test_42$index[[1]])),
label = "T42.1")
rm(view_test_42)
})
test_that('T43',{
# output creation
if(is.null(vur)) {
ht <- huxtable::huxtable(
column1 = c("Header1", 1:26),
column2 = c("Header2", letters[1:26])
)
# create title using add_titles then change title attributes
test_43 <- pharmaRTF::rtf_doc(ht)
test_43 <- pharmaRTF::add_titles(test_43,hf_line("add_titles Title 1"))
pharmaRTF::bold(test_43$titles[[1]]) <- TRUE
pharmaRTF::italic(test_43$titles[[1]]) <- TRUE
pharmaRTF::align(test_43$titles[[1]]) <- "right"
pharmaRTF::font(test_43$titles[[1]]) <- "Comic Sans"
pharmaRTF::font_size(test_43$titles[[1]]) <- 13
pharmaRTF::index(test_43$titles[[1]]) <- 4
# view titles and output to check changes
view_test_43 <- view_titles(test_43)
save(view_test_43, file = "~/pharmaRTF/vignettes/Validation/Test_Case_Code/output/view_test_43.RData")
rm(ht)
rm(test_43)
rm(view_test_43)
# load output for tests
} else {
load("~/pharmaRTF/vignettes/Validation/Test_Case_Code/output/view_test_43.RData")
}
# tests
skip_if(is.null(vur))
testthat::expect_true(all.equal(c(TRUE, TRUE,"right","Comic Sans",13,4),
c(view_test_43$bold[[1]],view_test_43$italic[[1]],view_test_43$align[[1]],
view_test_43$font[[1]],view_test_43$font_size[[1]],view_test_43$index[[1]])),
label = "T43.1")
rm(view_test_43)
})
test_that('T44',{
# output creation
if(is.null(vur)) {
ht <- huxtable::huxtable(
column1 = c("Header1", 1:26),
column2 = c("Header2", letters[1:26])
)
# create footnote using add_footnotes then change footnote attributes
test_44 <- pharmaRTF::rtf_doc(ht)
test_44 <- pharmaRTF::add_footnotes(test_44,hf_line("add_footnotes Title 1"))
pharmaRTF::bold(test_44$footnotes[[1]]) <- TRUE
pharmaRTF::italic(test_44$footnotes[[1]]) <- TRUE
pharmaRTF::align(test_44$footnotes[[1]]) <- "right"
pharmaRTF::font(test_44$footnotes[[1]]) <- "Comic Sans"
pharmaRTF::font_size(test_44$footnotes[[1]]) <- 13
pharmaRTF::index(test_44$footnotes[[1]]) <- 4
# view footnotes and output to check changes
view_test_44 <- view_footnotes(test_44)
save(view_test_44, file = "~/pharmaRTF/vignettes/Validation/Test_Case_Code/output/view_test_44.RData")
rm(ht)
rm(test_44)
rm(view_test_44)
# load output for tests
} else {
load("~/pharmaRTF/vignettes/Validation/Test_Case_Code/output/view_test_44.RData")
}
# tests
skip_if(is.null(vur))
testthat::expect_true(all.equal(c(TRUE, TRUE,"right","Comic Sans",13,4),
c(view_test_44$bold[[1]],view_test_44$italic[[1]],view_test_44$align[[1]],
view_test_44$font[[1]],view_test_44$font_size[[1]],view_test_44$index[[1]])),
label = "T44.1")
rm(view_test_44)
})
test_that('T45',{
# output creation
if(is.null(vur)) {
ht <- huxtable::huxtable(
column1 = c("Header1", 1:26),
column2 = c("Header2", letters[1:26])
)
# create title by importing from a separate file using a reader then change title attributes
test_45 <- pharmaRTF::rtf_doc(ht) %>% pharmaRTF::titles_and_footnotes_from_df(
from.file='~/pharmaRTF/vignettes/Validation/Test_Case_Code/input/titles_footnotes.xlsx',
reader=example_custom_reader,
test_number='T45')
pharmaRTF::bold(test_45$titles[[1]]) <- TRUE
pharmaRTF::italic(test_45$titles[[1]]) <- TRUE
pharmaRTF::align(test_45$titles[[1]]) <- "right"
pharmaRTF::font(test_45$titles[[1]]) <- "Comic Sans"
pharmaRTF::font_size(test_45$titles[[1]]) <- 13
pharmaRTF::index(test_45$titles[[1]]) <- 4
# view titles and output to check changes
view_test_45 <- view_titles(test_45)
save(view_test_45, file = "~/pharmaRTF/vignettes/Validation/Test_Case_Code/output/view_test_45.RData")
rm(ht)
rm(test_45)
rm(view_test_45)
# load output for tests
} else {
load("~/pharmaRTF/vignettes/Validation/Test_Case_Code/output/view_test_45.RData")
}
# tests
skip_if(is.null(vur))
testthat::expect_true(all.equal(c(TRUE, TRUE,"right","Comic Sans",13,4),
c(view_test_45$bold[[1]],view_test_45$italic[[1]],view_test_45$align[[1]],
view_test_45$font[[1]],view_test_45$font_size[[1]],view_test_45$index[[1]])),
label = "T45.1")
rm(view_test_45)
})
test_that('T46',{
# output creation
if(is.null(vur)) {
ht <- huxtable::huxtable(
column1 = c("Header1", 1:26),
column2 = c("Header2", letters[1:26])
)
# create footnote by importing from a separate file using a reader then change footnote attributes
test_46 <- pharmaRTF::rtf_doc(ht) %>% pharmaRTF::titles_and_footnotes_from_df(
from.file='~/pharmaRTF/vignettes/Validation/Test_Case_Code/input/titles_footnotes.xlsx',
reader=example_custom_reader,
test_number='T46')
pharmaRTF::bold(test_46$footnotes[[1]]) <- TRUE
pharmaRTF::italic(test_46$footnotes[[1]]) <- TRUE
pharmaRTF::align(test_46$footnotes[[1]]) <- "right"
pharmaRTF::font(test_46$footnotes[[1]]) <- "Comic Sans"
pharmaRTF::font_size(test_46$footnotes[[1]]) <- 13
pharmaRTF::index(test_46$footnotes[[1]]) <- 4
# view footnotes and output to check changes
view_test_46 <- view_footnotes(test_46)
save(view_test_46, file = "~/pharmaRTF/vignettes/Validation/Test_Case_Code/output/view_test_46.RData")
rm(ht)
rm(test_46)
rm(view_test_46)
# load output for tests
} else {
load("~/pharmaRTF/vignettes/Validation/Test_Case_Code/output/view_test_46.RData")
}
# tests
skip_if(is.null(vur))
testthat::expect_true(all.equal(c(TRUE, TRUE,"right","Comic Sans",13,4),
c(view_test_46$bold[[1]],view_test_46$italic[[1]],view_test_46$align[[1]],
view_test_46$font[[1]],view_test_46$font_size[[1]],view_test_46$index[[1]])),
label = "T46.1")
rm(view_test_46)
})
test_that('T47',{
# output creation
if(is.null(vur)) {
ht <- huxtable::huxtable(
column1 = c("Header1", 1:13),
column2 = c("Header2", letters[1:13])
)
huxtable::bold(ht)[, 1] <- TRUE
test_47 <- pharmaRTF::rtf_doc(ht)
# output rtf for manual review
pharmaRTF::write_rtf(test_47, file='~/pharmaRTF/vignettes/Validation/Test_Case_Code/output/test_47.rtf')
rm(ht)
rm(test_47)
}
# tests
skip_if(is.null(vur))
expect_true(vur[vur$ID == "T47.1", "Response"])
})
test_that('T48',{
# output creation
if(is.null(vur)) {
ht <- huxtable::huxtable(
column1 = c("Header1", 1:13),
column2 = c("Header2", letters[1:13])
)
huxtable::italic(ht)[, 1] <- TRUE
test_48 <- pharmaRTF::rtf_doc(ht)
# output rtf for manual review
pharmaRTF::write_rtf(test_48, file='~/pharmaRTF/vignettes/Validation/Test_Case_Code/output/test_48.rtf')
rm(ht)
rm(test_48)
}
# tests
skip_if(is.null(vur))
expect_true(vur[vur$ID == "T48.1", "Response"])
})
test_that('T49',{
# output creation
if(is.null(vur)) {
ht <- huxtable::huxtable(
column1 = c("Header1", 1:13),
column2 = c("Header2", letters[1:13])
)
huxtable::align(ht)[, 1] <- "right"
test_49 <- pharmaRTF::rtf_doc(ht)
# output rtf for manual review
pharmaRTF::write_rtf(test_49, file='~/pharmaRTF/vignettes/Validation/Test_Case_Code/output/test_49.rtf')
rm(ht)
rm(test_49)
}
# tests
skip_if(is.null(vur))
expect_true(vur[vur$ID == "T49.1", "Response"])
})
test_that('T50',{
# output creation
if(is.null(vur)) {
ht_test_50 <- huxtable::huxtable(
column1 = c("Header1", 1:13),
column2 = c("Header2", letters[1:13])
)
huxtable::row_height(ht_test_50) <- c(.08,.08,.08,.08,.08,.08,.08,.08,.08,.08,.08,.08,.08,.16)
huxtable::valign(ht_test_50)[, 1] <- "bottom"
test_50 <- pharmaRTF::rtf_doc(ht_test_50)
# output huxtable table to check table row height
save(ht_test_50, file = "~/pharmaRTF/vignettes/Validation/Test_Case_Code/output/ht_test_50.RData")
# output rtf for manual review
pharmaRTF::write_rtf(test_50, file='~/pharmaRTF/vignettes/Validation/Test_Case_Code/output/test_50.rtf')
rm(ht_test_50)
rm(test_50)
# load output for tests
} else {
load("~/pharmaRTF/vignettes/Validation/Test_Case_Code/output/ht_test_50.RData")
}
# tests
skip_if(is.null(vur))
testthat::expect_true(all.equal(c("1"=.08,"2"=.08,"3"=.08,"4"=.08,"5"=.08,"6"=.08,"7"=.08,"8"=.08,"9"=.08,"10"=.08,
"11"=.08,"12"=.08,"13"=.08,"14"=0.16),huxtable::row_height(ht_test_50)),label = "T50.1")
expect_true(vur[vur$ID == "T50.2", "Response"])
expect_true(vur[vur$ID == "T50.3", "Response"])
rm(ht_test_50)
})
test_that('T51',{
# output creation
if(is.null(vur)) {
ht_test_51 <- huxtable::huxtable(
column1 = c("Header1", 1:13),
column2 = c("Header2", letters[1:13])
)
huxtable::width(ht_test_51) <- 1.5
test_51 <- pharmaRTF::rtf_doc(ht_test_51)
# output huxtable table to check table width
save(ht_test_51, file = "~/pharmaRTF/vignettes/Validation/Test_Case_Code/output/ht_test_51.RData")
# output rtf for manual review
pharmaRTF::write_rtf(test_51, file='~/pharmaRTF/vignettes/Validation/Test_Case_Code/output/test_51.rtf')
rm(ht_test_51)
rm(test_51)
# load output for tests
} else {
load("~/pharmaRTF/vignettes/Validation/Test_Case_Code/output/ht_test_51.RData")
}
# tests
skip_if(is.null(vur))
testthat::expect_equal(1.5,huxtable::width(ht_test_51), label = "T51.1")
expect_true(vur[vur$ID == "T51.2", "Response"])
rm(ht_test_51)
})
test_that('T52',{
# output creation
if(is.null(vur)) {
ht_test_52 <- huxtable::huxtable(
column1 = c("Header1", 1:13),
column2 = c("Header2", letters[1:13])
)
huxtable::col_width(ht_test_52) <- c(.4, .8)
test_52 <- pharmaRTF::rtf_doc(ht_test_52)
# output huxtable table to check column width
save(ht_test_52, file = "~/pharmaRTF/vignettes/Validation/Test_Case_Code/output/ht_test_52.RData")
# output rtf for manual review
pharmaRTF::write_rtf(test_52, file='~/pharmaRTF/vignettes/Validation/Test_Case_Code/output/test_52.rtf')
rm(ht_test_52)
rm(test_52)
# load output for tests
} else {
load("~/pharmaRTF/vignettes/Validation/Test_Case_Code/output/ht_test_52.RData")
}
# tests
skip_if(is.null(vur))
testthat::expect_true(all.equal(c(column1 = 0.4, column2 = 0.8),huxtable::col_width(ht_test_52)),label = "T52.1")
expect_true(vur[vur$ID == "T52.2", "Response"])
rm(ht_test_52)
})
test_that('T53',{
# output creation
if(is.null(vur)) {
ht <- huxtable::huxtable(
column1 = c("Header1", 1:13),
column2 = c("Header2", letters[1:13])
)
ht <- huxtable::merge_cells(ht, 2, 1:2)
test_53 <- pharmaRTF::rtf_doc(ht)
# output rtf for manual review
pharmaRTF::write_rtf(test_53, file='~/pharmaRTF/vignettes/Validation/Test_Case_Code/output/test_53.rtf')
rm(ht)
rm(test_53)
}
# tests
skip_if(is.null(vur))
expect_true(vur[vur$ID == "T53.1", "Response"])
})
test_that('T54',{
# output creation
if(is.null(vur)) {
ht <- huxtable::huxtable(
column1 = c("Header1", 1:10),
column2 = c("Header2", letters[1:10])
)
test_54 <- pharmaRTF::rtf_doc(ht)
# change document level header rows to 0 and output rtf for manual review
pharmaRTF::header_rows(test_54) <- 0
pharmaRTF::write_rtf(test_54, file='~/pharmaRTF/vignettes/Validation/Test_Case_Code/output/test_54.rtf')
rm(ht)
rm(test_54)
}
# tests
skip_if(is.null(vur))
testthat::expect_true(vur[vur$ID == "T54.1", "Response"])
})
rm(vur)
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