recruit_mcmc: Estimate recruitment regression coefficients using MCMC

In atredennick/community_synchrony: Calculates syunchrony and stability metrics from time series data

Description

Estimate recruitment regression coefficients using MCMC

Usage

recruit_mcmc(dataframe, n_adapt = 5000, n_update = 10000,
  n_samples = 20000, n_thin = 50, sppList)

Arguments

dataframe	Merged time series dataframe of recruitment area for all species.
n_adapt	Number of iterations for adaptation of MCMC (default = 5000).
n_update	Number of iterations for update phase of MCMC (default = 10000).
n_samples	Number of samples to collect from MCMC after update phase (default = 20000).
n_thin	Number of iterations by which to thin the samples (default = 50).
sppList	Character vector of species code names for the site.

Value

Matrix of statistical results by fitted parameter.

Author(s)

Andrew Tredennick

atredennick/community_synchrony documentation built on May 10, 2019, 2:10 p.m.