simDNA: The simDNA package
In aumath-advancedr2019/simDNA: Simulate and analyze DNA
Description
R functions for simulating and analyzing DNA sequences.
Details
Contains function to simulate segregating sites matrices for various population types.
It also contains functions to analyze DNA based on segregating sites matrices or the site
frequency spectrum.
The names of these functions are the following
-
mutRate
-
pairwDiff
-
plot.DNAmat_class
-
plot.SFS_class
-
print.DNAmat_class
-
print.SFS_class
-
SFS
-
simDNAseq
-
SNP
-
summary.DNAmat_class
-
summary.SFS_class
-
TajimaD
Author(s)
Elias Arildskov, Camilla P. Kudahl and Maiken B. Poulsen.
aumath-advancedr2019/simDNA documentation built on Nov. 27, 2019, 11 a.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Description
R functions for simulating and analyzing DNA sequences.
Details
Contains function to simulate segregating sites matrices for various population types. It also contains functions to analyze DNA based on segregating sites matrices or the site frequency spectrum.
The names of these functions are the following
-
mutRate -
pairwDiff -
plot.DNAmat_class -
plot.SFS_class -
print.DNAmat_class -
print.SFS_class -
SFS -
simDNAseq -
SNP -
summary.DNAmat_class -
summary.SFS_class -
TajimaD
Author(s)
Elias Arildskov, Camilla P. Kudahl and Maiken B. Poulsen.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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