TajimaD: Tajima's D
In aumath-advancedr2019/simDNA: Simulate and analyze DNA
Description
Usage
Arguments
Details
Value
References
Examples
Description
The function calculates Tajima's D.
Usage
1
Arguments
SFS
vector with the site frequency spectrum.
Details
See SFS for explanation of the site frequency spectrum.
If one runs TajimaD
with a vector that contains anything other than natural numbers,
an error will occur.
For details about Tajima's D, consult the analyzeDNA vignette.
Value
Tajima's D.
References
Wakeley J. (2009) Coalescent Theory: An Introduction. Colorado:
Roberts and Company Publishers.
Examples
1
aumath-advancedr2019/simDNA documentation built on Nov. 27, 2019, 11 a.m.
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Description Usage Arguments Details Value References Examples
Description
The function calculates Tajima's D.
Usage
1 |
Arguments
SFS |
vector with the site frequency spectrum. |
Details
See SFS for explanation of the site frequency spectrum.
If one runs TajimaD
with a vector that contains anything other than natural numbers,
an error will occur.
For details about Tajima's D, consult the analyzeDNA vignette.
Value
Tajima's D.
References
Wakeley J. (2009) Coalescent Theory: An Introduction. Colorado: Roberts and Company Publishers.
Examples
1 |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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