Man pages for aursiber/MareyMap
Estimation of Meiotic Recombination Rates Using Marey Maps

Arabidopsis_thalianaThe marey map for the species Arabidopsis thaliana
argList-methodsMethods for function argList in package 'MareyMap'
Caenorhabditis_elegansThe marey map for the species Caenorhabditis_elegans
color-methodsAccessors for slot color in package 'MareyMap'
createOrder-methodscreateOrder
Drosophila_melanogasterThe marey map for the species Drosophila melanogaster
geneticDistances-methodsAccessors for slot geneticDistances
getInterList-methodsreturns a list of interpolation methods.
Homo_sapiensThe marey map for the species Homo sapiens (female, male and...
interpolate-methodsinterpolate
Interpolation-classClass "Interpolation"
interpolation-methodsset or returns an interpolation.
InterpolationParam-classClass "InterpolationParam"
InterpolationParam-methodsMethods for Function InterpolationParam in Package 'MareyMap'
interpolations-methodsaccessors for slot interpolations
MapCollection-classClass "MapCollection"
MapCollection-methodsConstructor for class MapCollection
mapName-methodsaccessors for the slot mapName
mapNames-methodsmapNames
MareyMap-classClass "MareyMap"
MareyMap-methodsConstructor for object of the class MareyMap.
markerNames-methodsAccessors for the class markerNames.
markerValidity-methodsaccessors for slot markerValidity
MMLoess-classClass "MMLoess". Interpolation method plug-in for MareyMap
MMSlidingWindow-classClass "MMSlidingWindow" Interpolation method plug-in for...
MMSpline3-classClass "MMSpline3" Interpolation using cubic splines
name-MethodsAccessor for slot name.
paramDefault-methodsAccessors for slot paramDefault
paramDesc-methodsAccessors for the slot paramDesc
paramFun-methodsaccessors for the slot paramFun
paramMax-methodsAccessors for the slot paramMax.
paramMin-methodsAccessors for slot paramMin.
paramName-methodsAccessors for the slot paramName.
paramType-methodsAccessors for the slot paramType.
paramValues-methodsAccessor for the slot paramValues.
persistent-methodsAccessors for the slot persistent.
physicalPositions-methodsAccessors for the slot physicalPositions
plotMarkers-methodsplotMarkers
plotModel-methodsplotModel
plotModels-methodsplotModels
plotRate-methodsplotRate
plotRates-methodsplotRates
query-methodsMethods for Function query
rates-methodsAccessors for the slot rates
registerInterpolationMethod-methodsregisterInterpolationMethods
removeMarker-methodsremoveMarker
SpeciesMaps-classClass "MapSet"
SpeciesMaps-methodsConstructor for the class MapSet.
speciesName-methodsAccessors for the slot setName.
speciesNames-methodssetNames
startMareyMapGUI-methodsMareyMapGUI launcher
textFile-methodstextFile
userParam-methodsuserParam
validPositions-methodsvalidPositions
visible-methodsAccessors for the slot visible
aursiber/MareyMap documentation built on Oct. 8, 2017, 7:47 a.m.