Description Usage Arguments Details Value Author(s) References
This function generates MA plot.
1 2 |
cD |
A countDat object. |
samplesA |
Either a character vector, identifying sample set A by either replicate name or sample name, or a numerical vector giving the columns of data in the 'countDat' object that forms sample set A. |
samplesB |
Either a character vector, identifying sample set B by either replicate name or sample name, or a numerical vector giving the columns of data in the 'countDat' object that forms sample set B. |
scale |
If given, defines the scale on which the log-ratios will be plotted. |
xlab |
Label for the X-axis. Defaults to "A". |
ylab |
Label for the Y-axis. Defaults to "M". |
... |
Any other parameters to be passed to the plot function. |
This function makes MA plot from count dat object.
Returns MA plot.
AJ Vaestermark, JR Walters.
The "doseR" package, 2018 (in press).
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