Man pages for averissimo/brca.data
BRCA gene expression and clinical data from TCGA (with import script)

brca.databrca.data: Breast Cancer data from TCGA
clinicalClinical data per tissue type
fpkm.per.tissueGene expression levels per tissue type.
fpkm.per.tissue.barcodePatient's barcode per tissue type
gdcOriginal data from GDC
gene.rangesGenomic ranges with description for genes in tissue matrices
getParticipantCodeGet Participant part of TCGA Barcode
getSampleTypeCodeGet Sample Type part of TCGA Barcode
joinRNASeqDataJoins all expression data in a single matrix
loadGDCRnaSeqGet rnaseq assay data to GDC object
mutationList with mutation data
averissimo/brca.data documentation built on July 26, 2017, 8:04 p.m.