brca.data: brca.data: Breast Cancer data from TCGA
In averissimo/brca.data: BRCA gene expression and clinical data from TCGA (with import script)
Description
To use this package load the following datasets:
Details
- 'tissue.ix': indexes of all tissues;
- 'tissue': gene expression data for all types of tissues, see 'names(tissue)';
- ‘tissue.barcode': Patient’s participation data code (TCGA-XX-XXXX) per type of tissue;
- 'clinical': Clinical data per tissue type. Has the same structure as tissue;
- 'gene.ranges': Genomic ranges with description for genes in tissue[.all] matrices.
To see how the data was retrieved, check the 'README.Rmd' in the package source.
averissimo/brca.data documentation built on May 20, 2019, 11:13 a.m.
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Description
To use this package load the following datasets:
Details
- 'tissue.ix': indexes of all tissues; - 'tissue': gene expression data for all types of tissues, see 'names(tissue)'; - ‘tissue.barcode': Patient’s participation data code (TCGA-XX-XXXX) per type of tissue; - 'clinical': Clinical data per tissue type. Has the same structure as tissue; - 'gene.ranges': Genomic ranges with description for genes in tissue[.all] matrices.
To see how the data was retrieved, check the 'README.Rmd' in the package source.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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