process_fitoutput: add gene annotation from a reannotation package to limma...
In axelmuller/geometric2: NURSA annotation aid
Description
Usage
Arguments
Examples
Description
add gene annotation from a reannotation package to limma output
Usage
1
process_fitoutput(gse_id, fitfile, anno_package)
Arguments
gse_id
a valid GSE ID e.g.: "GSE65309"
fitfile
path to a file retrieved from get_fitfiles
anno_package
for example: mogene10sttranscriptcluster.db
Examples
1
2
process_fitoutput("GSE65309", fitfile, mogene10sttranscriptcluster.db)
lapply(result_files, function(x) process_fitoutput("GSE65309", x, mogene10sttranscriptcluster.db))
axelmuller/geometric2 documentation built on May 25, 2019, 6:26 p.m.
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Description Usage Arguments Examples
Description
add gene annotation from a reannotation package to limma output
Usage
1 | process_fitoutput(gse_id, fitfile, anno_package)
|
Arguments
gse_id |
a valid GSE ID e.g.: "GSE65309" |
fitfile |
path to a file retrieved from get_fitfiles |
anno_package |
for example: mogene10sttranscriptcluster.db |
Examples
1 2 | process_fitoutput("GSE65309", fitfile, mogene10sttranscriptcluster.db)
lapply(result_files, function(x) process_fitoutput("GSE65309", x, mogene10sttranscriptcluster.db))
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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