export_graph: Export a graph

In baumbachlab/keypathwayminer-R: KeyPathwayMiner R-Package

Export a graph

Description

Export a graph in sif format, csv format, igraph object, tab seperated, custom format and more.

Usage

export_graph(pathway_object, file, sep = "\t", format = "")

## S4 method for signature 'Pathway'
export_graph(pathway_object, file, sep = "\t", format = "")

Arguments

pathway_object	pathway object of a configuration.
file	path where the file is saved
sep	seperator used to seperate the graph file.
format	format of the file. If specified sep slot is not used. Possible formats are c("custom","sif","csv","igraph","gml","graphml", "xlsx")

Methods (by class)

• Pathway: Use write.table to export a graph.

baumbachlab/keypathwayminer-R documentation built on June 29, 2023, 11:21 a.m.