read_meta_info-methods: Generic function to read image meta info given a file

In bbuchsbaum/neuroim2: Data Structures for Brain Imaging Data

Generic function to read image meta info given a file

Description

Reads meta information from image files based on their format (NIFTI or AFNI).

Usage

read_meta_info(x, file_name)

## S4 method for signature 'NIFTIFormat'
read_meta_info(x, file_name)

## S4 method for signature 'AFNIFormat'
read_meta_info(x, file_name)

Arguments

x	A FileFormat object (either NIFTIFormat or AFNIFormat)
file_name	A character string specifying the file name to read meta information from

Details

These methods use format-specific functions to read the header information and create the appropriate meta information object. The '.read_meta_info' helper function is used internally to streamline the process for both formats.

Value

A list containing the meta information read from the file.

An object of class NIFTIMetaInfo or AFNIMetaInfo, depending on the input format

Examples

# Create a NIFTI format descriptor
fmt <- new("NIFTIFormat",
           file_format = "NIFTI",
           header_encoding = "raw",
           header_extension = "nii",
           data_encoding = "raw",
           data_extension = "nii")

# Read metadata from a NIFTI file

fname <- system.file("extdata", "global_mask_v4.nii", package="neuroim2")
meta <- read_meta_info(fmt, fname)

# Access metadata properties
dim(meta)          # Image dimensions
trans(meta)        # Transformation matrix

bbuchsbaum/neuroim2 documentation built on Feb. 26, 2025, 3:49 p.m.