R/RcppExports.R

In bbuchsbaum/neuroim2: Data Structures and IO for Neuroimaging Data with an Emphasis on Functional Magnetic Resonance Imaging (FMRI)

# Generated by using Rcpp::compileAttributes() -> do not edit by hand
# Generator token: 10BE3573-1514-4C36-9D1C-5A225CD40393

indexToGridCpp <- function(idx, array_dim) {
    .Call(`_neuroim2_indexToGridCpp`, idx, array_dim)
}

local_spheres <- function(centers, radius, spacing, dim) {
    .Call(`_neuroim2_local_spheres`, centers, radius, spacing, dim)
}

box_nbhd <- function(arr, dims, x, y, z, window, out, slicedim) {
    .Call(`_neuroim2_box_nbhd`, arr, dims, x, y, z, window, out, slicedim)
}

box_blur <- function(arr, mask_idx, window) {
    .Call(`_neuroim2_box_blur`, arr, mask_idx, window)
}

gaussian_weights <- function(window, sigma, spacing) {
    .Call(`_neuroim2_gaussian_weights`, window, sigma, spacing)
}

gaussian_blur_cpp <- function(arr, mask_idx, window, sigma, spacing) {
    .Call(`_neuroim2_gaussian_blur_cpp`, arr, mask_idx, window, sigma, spacing)
}

bilateral_filter_cpp <- function(arr, mask_idx, window, spatial_sigma, intensity_sigma, spacing) {
    .Call(`_neuroim2_bilateral_filter_cpp`, arr, mask_idx, window, spatial_sigma, intensity_sigma, spacing)
}

gridToIndexSingleCpp <- function(coords, array_dim) {
    .Call(`_neuroim2_gridToIndexSingleCpp`, coords, array_dim)
}

bilateral_filter_4d_cpp <- function(arr, mask_idx, spatial_window, temporal_window, spatial_sigma, intensity_sigma, temporal_sigma, intensity_sd, spacing) {
    .Call(`_neuroim2_bilateral_filter_4d_cpp`, arr, mask_idx, spatial_window, temporal_window, spatial_sigma, intensity_sigma, temporal_sigma, intensity_sd, spacing)
}

find_seqnum <- function(clens, idx) {
    .Call(`_neuroim2_find_seqnum`, clens, idx)
}

grid_to_intvec <- function(D, vox) {
    .Call(`_neuroim2_grid_to_intvec`, D, vox)
}

exgridToIndex3DCpp <- function(array_dim, iind, jind, kind) {
    .Call(`_neuroim2_exgridToIndex3DCpp`, array_dim, iind, jind, kind)
}

exgridToIndex4DCpp <- function(array_dim, iind, jind, kind, mind) {
    .Call(`_neuroim2_exgridToIndex4DCpp`, array_dim, iind, jind, kind, mind)
}

gridToIndexCpp <- function(array_dim, voxmat) {
    .Call(`_neuroim2_gridToIndexCpp`, array_dim, voxmat)
}

gridToIndex3DCpp <- function(array_dim, voxmat) {
    .Call(`_neuroim2_gridToIndex3DCpp`, array_dim, voxmat)
}

local_sphere <- function(vx, vy, vz, radius, spacing, dim) {
    .Call(`_neuroim2_local_sphere`, vx, vy, vz, radius, spacing, dim)
}

kernel_filt_3d_cpp <- function(data, kernel) {
    .Call(`_neuroim2_kernel_filt_3d_cpp`, data, kernel)
}